4cqy

X-ray diffraction
2.05Å resolution

H5 (tyTy) Del133/Ile155Thr Mutant Haemagglutinin in Complex with Avian Receptor Analogue LSTa

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
PDBe Complex ID:
PDB-CPX-173117 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (3 distinct):
Hemagglutinin Chains: A, C, E
Molecule details ›
Chains: A, C, E
Length: 327 amino acids
Theoretical weight: 37.01 KDa
Source organism: Influenza A virus (A/turkey/Turkey/1/2005(H5N1))
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q207Z6 (Residues: 17-342; Coverage: 57%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains:
Hemagglutinin HA2 chain Chains: B, D, F
Molecule details ›
Chains: B, D, F
Length: 166 amino acids
Theoretical weight: 19.13 KDa
Source organism: Influenza A virus (A/turkey/Turkey/1/2005(H5N1))
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q207Z6 (Residues: 347-512; Coverage: 29%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains: Hemagglutinin Ectodomain; Chain B

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, GAL, SIA
2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I04
Spacegroup: P21
Unit cell:
a: 89Å b: 116.35Å c: 101.84Å
α: 90° β: 91.69° γ: 90°
R-values:
R R work R free
0.194 0.193 0.227
Expression system: Spodoptera frugiperda