4lxv

X-ray diffraction
3Å resolution

Crystal Structure of the Hemagglutinin from a H1N1pdm A/WASHINGTON/5/2011 virus

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
PDBe Complex ID:
PDB-CPX-125356 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (3 distinct):
Hemagglutinin Chains: A, C, E, G, I, K
Molecule details ›
Chains: A, C, E, G, I, K
Length: 332 amino acids
Theoretical weight: 36.81 KDa
Source organism: H1N1 subtype
Expression system: Trichoplusia ni
UniProt:
  • Canonical: J7MFR5 (Residues: 18-344; Coverage: 58%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains:
Hemagglutinin HA2 chain Chains: B, D, F, H, J, L
Molecule details ›
Chains: B, D, F, H, J, L
Length: 182 amino acids
Theoretical weight: 20.83 KDa
Source organism: H1N1 subtype
Expression system: Trichoplusia ni
UniProt:
  • Canonical: J7MFR5 (Residues: 345-518; Coverage: 31%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains: Hemagglutinin Ectodomain; Chain B

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 22-ID
Spacegroup: P212121
Unit cell:
a: 73.241Å b: 226.002Å c: 271.003Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.207 0.205 0.23
Expression system: Trichoplusia ni