› 4ebg

X-ray diffraction
1.2Å resolution

Crystal structure of a DUF4467 family protein (SAV0303) from Staphylococcus aureus subsp. aureus Mu50 at 1.35 A resolution

Released:
DOI: 10.2210/pdb4ebg/pdb
PDB entry 4ebg coloured by chain, front view.
PDB entry 4ebg coloured by chain, side view.
PDB entry 4ebg coloured by chain, top view.
Source organism: Staphylococcus aureus subsp. aureus Mu50
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-101997 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DUF4467 domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 101 amino acids
Theoretical weight: 12.22 KDa
Source organism: Staphylococcus aureus subsp. aureus Mu50
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A0H3JX79 (Residues: 25-124; Coverage: 97%)
Gene name: SAV0303
Sequence domains: Domain of unknown function with cystatin-like fold (DUF4467)
Structure domains: Nuclear Transport Factor 2; Chain: A,

Ligands and Environments

2 bound ligands:
Ligand EDO 1 x EDO
Ligand PO4 1 x PO4
1 modified residue:
Ligand MSE 6 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL12-2
Spacegroup: P1
Unit cell:
a: 32.244Å b: 35.058Å c: 50.073Å
α: 86.06° β: 79.66° γ: 71.6°
R-values:
R R work R free
0.138 0.136 0.167
Expression system: Escherichia coli

Quick links