4hl6

X-ray diffraction
2.12Å resolution

YfdE from Escherichia coli

Released:
Source organism: Escherichia coli K-12
Primary publication:
Function and X-ray crystal structure of Escherichia coli YfdE.
OpenAccess logo PLoS One 8 e67901 (2013)
PMID: 23935849

Function and Biology Details

Reaction catalysed:
Acetyl-CoA + oxalate = acetate + oxalyl-CoA
Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
PDBe Complex ID:
PDB-CPX-550613 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Acetyl-CoA:oxalate CoA-transferase Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 401 amino acids
Theoretical weight: 43.88 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli
UniProt:
  • Canonical: P76518 (Residues: 1-381; Coverage: 100%)
Gene names: JW2368, b2371, yfdE
Sequence domains: CoA-transferase family III
Structure domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-G
Spacegroup: C2
Unit cell:
a: 111.422Å b: 79.527Å c: 276.189Å
α: 90° β: 99.95° γ: 90°
R-values:
R R work R free
0.191 0.188 0.236
Expression system: Escherichia coli