› 4nrd

X-ray diffraction
2.1Å resolution

Crystal structure of a putative GDSL-like lipase (BACOVA_04955) from Bacteroides ovatus ATCC 8483 at 2.10 A resolution

Released:
DOI: 10.2210/pdb4nrd/pdb
PDB entry 4nrd coloured by chain, front view.
PDB entry 4nrd coloured by chain, side view.
PDB entry 4nrd coloured by chain, top view.
Source organism: Bacteroides ovatus ATCC 8483
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-245196 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Uncharacterized protein Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 227 amino acids
Theoretical weight: 26.91 KDa
Source organism: Bacteroides ovatus ATCC 8483
Expression system: Escherichia coli
Structure domains: SGNH hydrolase

Ligands and Environments

1 bound ligand:
Ligand EDO 3 x EDO
1 modified residue:
Ligand MSE 42 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P1
Unit cell:
a: 70.941Å b: 70.895Å c: 76.618Å
α: 88.78° β: 84.7° γ: 60.13°
R-values:
R R work R free
0.172 0.17 0.208
Expression system: Escherichia coli

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