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Crystal Structure of the Complex of SYG-1 D1-D2 and SYG-2 D1-D4

Source organism: Caenorhabditis elegans
Biochemical function: not assigned
Biological process: not assigned
Cellular component: not assigned

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GO terms

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Sequence families

Pfam Protein families (Pfam)
PF08205
Domain description: CD80-like C2-set immunoglobulin domain
Occurring in:
  1. Synaptogenesis protein syg-1
  2. Synaptogenesis protein syg-2
The deposited structure of PDB entry 4ofy contains 3 copies of Pfam domain PF08205 (CD80-like C2-set immunoglobulin domain ) in Synaptogenesis protein syg-1. Showing 1 copy in chain A.
The deposited structure of PDB entry 4ofy contains 3 copies of Pfam domain PF08205 (CD80-like C2-set immunoglobulin domain ) in Synaptogenesis protein syg-2. Showing 1 copy in chain D.

PF22705
Domain description: Butyrophilin subfamily 3 member A2-like, Ig-C domain
Occurring in:
  1. Synaptogenesis protein syg-2

PF07686
Domain description: Immunoglobulin V-set domain
Occurring in:
  1. Synaptogenesis protein syg-2
The deposited structure of PDB entry 4ofy contains 3 copies of Pfam domain PF07686 (Immunoglobulin V-set domain) in Synaptogenesis protein syg-2. Showing 1 copy in chain D.

PF07679
Domain description: Immunoglobulin I-set domain
Occurring in:
  1. Synaptogenesis protein syg-1
The deposited structure of PDB entry 4ofy contains 3 copies of Pfam domain PF07679 (Immunoglobulin I-set domain) in Synaptogenesis protein syg-1. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR036179
Domain description: Immunoglobulin-like domain superfamily
Occurring in:
  1. Synaptogenesis protein syg-1
  2. Synaptogenesis protein syg-2
IPR007110
Domain description: Immunoglobulin-like domain
Occurring in:
  1. Synaptogenesis protein syg-1
  2. Synaptogenesis protein syg-2
IPR013783
Domain description: Immunoglobulin-like fold
Occurring in:
  1. Synaptogenesis protein syg-1
  2. Synaptogenesis protein syg-2
IPR003599
Domain description: Immunoglobulin domain subtype
Occurring in:
  1. Synaptogenesis protein syg-1
  2. Synaptogenesis protein syg-2
IPR003598
Domain description: Immunoglobulin subtype 2
Occurring in:
  1. Synaptogenesis protein syg-2
IPR013162
Domain description: CD80-like, immunoglobulin C2-set
Occurring in:
  1. Synaptogenesis protein syg-1
  2. Synaptogenesis protein syg-2
IPR013098
Domain description: Immunoglobulin I-set
Occurring in:
  1. Synaptogenesis protein syg-1

Structure domain

CATH CATH domain
2.60.40.10
Class: Mainly Beta
Architecture: Sandwich
Topology: Immunoglobulin-like
Homology: Immunoglobulins
Occurring in:
  1. Synaptogenesis protein syg-1
  2. Synaptogenesis protein syg-2
The deposited structure of PDB entry 4ofy contains 6 copies of CATH domain 2.60.40.10 (Immunoglobulin-like) in Synaptogenesis protein syg-1. Showing 2 copies in chain A.
The deposited structure of PDB entry 4ofy contains 12 copies of CATH domain 2.60.40.10 (Immunoglobulin-like) in Synaptogenesis protein syg-2. Showing 4 copies in chain D.

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