Function and Biology

Structure of NavMS in complex with channel blocking compound

Source organism: Magnetococcus marinus MC-1
Biochemical function: calcium-activated cation channel activity
Biological process: transmembrane transport
Cellular component: CatSper complex

Sequence families

Pfam Protein families (Pfam)
PF08016
Domain description: Polycystin cation channel
Occurring in:
  1. Ion transport domain-containing protein

PF00520
Domain description: Ion transport protein
Occurring in:
  1. Ion transport domain-containing protein
The deposited structure of PDB entry 4p9p contains 4 copies of Pfam domain PF00520 (Ion transport protein) in Ion transport domain-containing protein. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR005821
Domain description: Ion transport domain
Occurring in:
  1. Ion transport domain-containing protein
IPR043203
Domain description: Voltage-gated cation channel calcium and sodium
Occurring in:
  1. Ion transport domain-containing protein

Structure domain

CATH CATH domain
1.10.287.70
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Helix Hairpins
Homology: Helix Hairpins
Occurring in:
  1. Ion transport domain-containing protein
The deposited structure of PDB entry 4p9p contains 4 copies of CATH domain 1.10.287.70 (Helix Hairpins) in Ion transport domain-containing protein. Showing 1 copy in chain A.