1 bound ligand:
STL 601(A)
Environment details ›
Jmol._Canvas2D (Jmol) "_PDBE_JMOL"[x]
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/core/package.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/core/core.z.js
-- required by ClazzNode
Jmol JavaScript applet _PDBE_JMOL__15093337784437999__ initializing
Jmol getValue debug null
Jmol getValue logLevel null
Jmol getValue allowjavascript true
AppletRegistry.checkIn(_PDBE_JMOL__15093337784437999__)
vwrOptions:
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setting document base to "https://www.ebi.ac.uk/pdbe/entry/pdb/4pp6/ligands"
(C) 2012 Jmol Development
Jmol Version: 14.3.6_2014.08.17b 2014-08-17 17:24
java.vendor: Java2Script (HTML5)
java.version: JSmol 14.3.6_2014.08.14
os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)
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APPLETREADYCallback = "Jmol._readyCallback"
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Jmol getValue CLICKCallback null
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Jmol getValue ECHOCallback null
Jmol getValue ERRORCallback null
Jmol getValue EVALCallback null
Jmol getValue HOVERCallback null
Jmol getValue LOADSTRUCTCallback null
Jmol getValue MEASURECallback null
Jmol getValue MESSAGECallback null
Jmol getValue MINIMIZATIONCallback null
Jmol getValue PICKCallback null
Jmol getValue RESIZECallback null
Jmol getValue SCRIPTCallback null
Jmol getValue SYNCCallback null
Jmol getValue STRUCTUREMODIFIEDCallback null
Jmol getValue doTranslate null
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Jmol getValue load null
Jmol applet _PDBE_JMOL__15093337784437999__ ready
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/core/corescript.z.js
script 1 started
FileManager.getAtomSetCollectionFromFile(https://www.ebi.ac.uk/pdbe/entry-files/download/4pp6.cif)
FileManager opening 1 https://www.ebi.ac.uk/pdbe/entry-files/download/4pp6.cif
The Resolver thinks MMCif
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/J/adapter/readers/cif/MMCifReader.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/J/adapter/readers/cif/CifReader.js
-- required by J.adapter.readers.cif.MMCifReader
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/JU/CifDataParser.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/core/corebio.z.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/J/render/MeshRenderer.js
-- required by J.renderbio.BioShapeRenderer
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/J/shape/Mesh.js
TITLE: Resveratrol modulates the inflammatory response via an estrogen receptor-signal integration network.
Setting space group name to HM:P 1 21 1
found biomolecule 1: A,B,C,D,E,F,G,H,I,J
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: doub
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
unknown CIF bond order: sing
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/core/coresym.z.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/JU/Tensor.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/JU/Eigen.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/javajs/api/EigenInterface.js
-- required by JU.Eigen
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/JU/EigenSort.js
Time for openFile(*4pp6): 1755 ms
reading 4198 atoms
ModelSet: haveSymmetry:false haveUnitcells:true haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
model 1.1 alternative locations: AB
Default Van der Waals type for model set to Jmol
4198 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
TITLE: Resveratrol modulates the inflammatory response via an estrogen receptor-signal integration network.
found biomolecule 1: A,B,C,D,E,F,G,H,I,J
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/core/corescriptmath.z.js
Script completed
Jmol script terminated
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/JV/PropertyManager.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/core/coreprop.z.js
-- required by JV.PropertyManager
script 2 started
antialiasDisplay = true
antialiasTranslucent = true
debugScript = false
showScript = 0
chainCaseSensitive = true
measurementUnits = "angstroms"
autobond = true
forceAutoBond = true
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/core/corescriptcmd.z.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/J/shape/Halos.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/J/shapesurface/Contact.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/core/coresurface.z.js
-- required by J.shapesurface.Contact
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/J/shape/MeshCollection.js
-- required by J.shapesurface.Isosurface
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/JU/XmlUtil.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/J/c/HB.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/JU/ContactPair.js
contact ID "hb" {environmentAtoms} hbond color TRANSLUCENT 0.2 purple;
Contact pairs: 15
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/J/jvxl/readers/IsoIntersectReader.js
Contacts: 2 with net volume 2.8018188409355576 A^3
RasMol pseudo-hbond calculation
1 hydrogen bonds
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/core/coretext.z.js
Script completed
Jmol script terminated
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/JV/OutputManagerJS.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/JV/OutputManager.js
-- required by JV.OutputManagerJS
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/J/render/HalosRenderer.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/J/g3d/CircleRenderer.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/J/rendersurface/ContactRenderer.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/javajs/img/JpgEncoder.js
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/javajs/img/ImageEncoder.js
-- required by javajs.img.Huffman
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/javajs/api/GenericImageEncoder.js
-- required by javajs.img.ImageEncoder
script 3 started
antialiasDisplay = true
antialiasTranslucent = true
debugScript = false
showScript = 0
chainCaseSensitive = true
measurementUnits = "angstroms"
autobond = true
forceAutoBond = true
contact ID "hb" {environmentAtoms} hbond color TRANSLUCENT 0.2 purple;
Contact pairs: 25
Contacts: 6 with net volume 3.496901347660647 A^3
RasMol pseudo-hbond calculation
2 hydrogen bonds
Script completed
Jmol script terminated
script 4 started
Script completed
Jmol script terminated
STL 601(B)
Environment details ›