4qzv

X-ray diffraction
2.59Å resolution

Bat-derived coronavirus HKU4 uses MERS-CoV receptor human CD26 for cell entry

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-107103 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (4 distinct):
Dipeptidyl peptidase 4 Chains: A, C
Molecule details ›
Chains: A, C
Length: 734 amino acids
Theoretical weight: 85.29 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: P27487 (Residues: 39-766; Coverage: 95%)
Gene names: ADCP2, CD26, DPP4
Sequence domains:
Structure domains:
Spike protein S1 Chains: B, D
Molecule details ›
Chains: B, D
Length: 246 amino acids
Theoretical weight: 27.02 KDa
Source organism: Tylonycteris bat coronavirus HKU4
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: A3EX94 (Residues: 372-611; Coverage: 18%)
Gene names: 2, S
Sequence domains: Betacoronavirus spike glycoprotein S1, receptor binding
Structure domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: NAG, BMA
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U
Unit cell:
a: 78.801Å b: 203.166Å c: 207.753Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.191 0.19 0.224
Expression system: Spodoptera frugiperda