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(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL

LUT model coordinates provided in the wwPDB chemical component dictionary
(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL in PDB entry 4rku, assembly 1, side view.
(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL in PDB entry 4rku, assembly 1, top view.
Formula: C40 H56 O2
Molecular weight: 569 Da

Environment details NEW

LUT 1501 bound to chain 1
Ligands and residuesInteractions
 hydrophobic
negatively charged
aromatic
polar
cystein
water
positively charged
other
glycine
bound molecule
glycans (SNFG)
aromatic
clashes
covalent
electrostatic
metal hydrophobic
vdw
MET88VAL91PRO92LEU95ASP166PRO167LEU168TYR170LEU190ALA194ILE198GLN201THR208CLA1001CLA1002CLA1003

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The above 2D and 3D (Mol*) views of ligand interactions use quaternary structure derived from the PDB entry.
Please note:
  • Some chain IDs in the tooltip are followed by a number in square brackets. This number corresponds to the operation ID (mmCIF ‘oper_expression’) used to transform the chain.
  • The structure seen in Mol* (3D view) was protonated using ChimeraX.
  • Interactions were calculated using Arpeggio (see details for interaction types).
  • The colour scheme used is consistent with Clustal X.

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EBI resources (LUT)