› 4rvt

X-ray diffraction
2.4Å resolution

MAP4K4 in complex with a pyridin-2(1H)-one derivative

Released:
DOI: 10.2210/pdb4rvt/pdb
PDB entry 4rvt coloured by chain, front view.
PDB entry 4rvt coloured by chain, side view.
PDB entry 4rvt coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Neuritogenic militarinone-inspired 4-hydroxypyridones target the stress pathway kinase MAP4K4.
Schröder P, Förster T, Kleine S, Becker C, Richters A, Ziegler S, Rauh D, Kumar K, Waldmann H
Angew Chem Int Ed Engl 54 12398-403 (2015)
PMID: 25908259

Function and Biology Details

Reaction catalysed: 
ATP + a protein = ADP + a phosphoprotein
Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-132056 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Mitogen-activated protein kinase kinase kinase kinase 4 Chains: A, B
Molecule details ›
Chains: A, B
Length: 328 amino acids
Theoretical weight: 37.54 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: O95819 (Residues: 1-325; Coverage: 26%)
Gene names: HGK, KIAA0687, MAP4K4, NIK
Sequence domains: Protein kinase domain
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand 3XM 1 x 3XM
Ligand MES 1 x MES
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SLS BEAMLINE X10SA
Spacegroup: P212121
Unit cell:
a: 79.99Å b: 90.25Å c: 90.97Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.212 0.209 0.278
Expression system: Spodoptera frugiperda

Quick links

Citations

2 review citations

MAP4K4: an emerging therapeutic target in cancer.
Gao et al. (2016)
1 more

1 mention without citation

Improving binding mode and binding affinity predictions of docking by ligand-based search of protein conformations: evaluation in D3R grand challenge 2015.
Xu et al. (2017)