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Crystal structure of P domain from norovirus strain Saga4 in complex with HBGA type Lea (triglycan)

Source organism: Norovirus Hu/GII-4/Saga4/2006/JP
Biochemical function: not assigned
Biological process: not assigned
Cellular component: not assigned

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GO terms

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF08435
Domain description: Calicivirus coat protein C-terminal
Occurring in:
  1. VP1
The deposited structure of PDB entry 4wzl contains 2 copies of Pfam domain PF08435 (Calicivirus coat protein C-terminal) in VP1. Showing 1 copy in chain A.

InterPro InterPro annotation
IPR013643
Domain description: Calicivirus coat protein C-terminal
Occurring in:
  1. VP1

Structure domains

CATH CATH domains
2.40.510.10
Class: Mainly Beta
Architecture: Beta Barrel
Topology: Nucleoplasmin-like/VP (viral coat and capsid proteins)
Homology: Positive stranded ssRNA viruses
Occurring in:
  1. VP1
The deposited structure of PDB entry 4wzl contains 2 copies of CATH domain 2.40.510.10 (Nucleoplasmin-like/VP (viral coat and capsid proteins)) in VP1. Showing 1 copy in chain A.
2.40.30.120
Class: Mainly Beta
Architecture: Beta Barrel
Topology: Elongation Factor Tu (Ef-tu); domain 3
Homology: Positive stranded ssRNA viruses
Occurring in:
  1. VP1
The deposited structure of PDB entry 4wzl contains 2 copies of CATH domain 2.40.30.120 (Elongation Factor Tu (Ef-tu); domain 3) in VP1. Showing 1 copy in chain A.

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