4yfk

X-ray diffraction
3.57Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
PDBe Complex ID:
PDB-CPX-108535 (preferred)
Entry contents:
5 distinct polypeptide molecules
Macromolecules (5 distinct):
DNA-directed RNA polymerase subunit alpha Chains: A, B, G, H
Molecule details ›
Chains: A, B, G, H
Length: 329 amino acids
Theoretical weight: 36.56 KDa
Source organism: Escherichia coli O139:H28 str. E24377A
Expression system: Escherichia coli #1/H766
UniProt:
  • Canonical: A7ZSI4 (Residues: 1-329; Coverage: 100%)
Gene names: EcE24377A_3778, rpoA
Sequence domains:
Structure domains:
DNA-directed RNA polymerase subunit beta Chains: C, I
Molecule details ›
Chains: C, I
Length: 1342 amino acids
Theoretical weight: 150.82 KDa
Source organism: Escherichia coli O139:H28 str. E24377A
Expression system: Escherichia coli #1/H766
UniProt:
  • Canonical: A7ZUK1 (Residues: 1-1342; Coverage: 100%)
Gene names: EcE24377A_4528, rpoB
Sequence domains:
DNA-directed RNA polymerase subunit beta' Chains: D, J
DNA-directed RNA polymerase subunit omega Chains: E, K
RNA polymerase sigma factor RpoD Chains: F, L

Ligands and Environments

3 bound ligands:
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: CHESS BEAMLINE F1
Spacegroup: P212121
Unit cell:
a: 186.105Å b: 206.438Å c: 307.993Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.217 0.217 0.252
Expression system: Escherichia coli #1/H766