› 4zgf

X-ray diffraction
1Å resolution

Crystal structure of a duf4847 family protein (BVU_2626) from Bacteroides vulgatus ATCC 8482 at 1.00 A resolution

Released:
DOI: 10.2210/pdb4zgf/pdb
PDB entry 4zgf coloured by chain, front view.
PDB entry 4zgf coloured by chain, side view.
PDB entry 4zgf coloured by chain, top view.
Source organism: Phocaeicola vulgatus ATCC 8482
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107886 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DUF4847 domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 141 amino acids
Theoretical weight: 15.78 KDa
Source organism: Phocaeicola vulgatus ATCC 8482
Expression system: Escherichia coli
UniProt:
  • Canonical: A6L3L5 (Residues: 25-164; Coverage: 85%)
Gene name: BVU_2626
Sequence domains: Domain of unknown function (DUF4847)
Structure domains: Lipocalin

Ligands and Environments

4 bound ligands:
Ligand CA 3 x CA
Ligand P6G 4 x P6G
Ligand ACT 2 x ACT
Ligand BEZ 1 x BEZ
1 modified residue:
Ligand MSE 1 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL14-1
Spacegroup: P212121
Unit cell:
a: 31.747Å b: 55.486Å c: 76.176Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.117 0.116 0.136
Expression system: Escherichia coli

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