PDB 5d9q structure summary ‹ Protein Data Bank in Europe (PDBe)

Function and Biology Details

Biochemical function:

structural molecule activity

Biological process:

not assigned

Cellular component:

viral envelope

Sequence domains:

2 more domains

Structure analysis Details

Assembly composition:

hetero pentadecamer (preferred)

PDBe Complex ID:

PDB-CPX-230351 (preferred)

Entry contents:

5 distinct polypeptide molecules

Macromolecules (11 distinct):

Envelope glycoprotein gp160 Chains: A, G, J

Molecule details ›

Chains: A, G, J
Length: 472 amino acids
Theoretical weight: 52.86 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Homo sapiens
UniProt:

Canonical: Q2N0S6 (Residues: 30-501; Coverage: 55%)

Gene name: env
Sequence domains: Envelope glycoprotein GP120

Transmembrane protein gp41 Chains: B, C, K

Molecule details ›

Chains: B, C, K
Length: 152 amino acids
Theoretical weight: 17.03 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Homo sapiens
UniProt:

Canonical: Q2N0S6 (Residues: 509-660; Coverage: 18%)

Gene name: env
Sequence domains: Retroviral envelope protein

PGT122 light chain,Ig lambda-3 chain C regions Chains: E, L, M

Molecule details ›

Chains: E, L, M
Length: 211 amino acids
Theoretical weight: 22.71 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

Ig-like domain-containing protein Chains: F, H, N

Molecule details ›

Chains: F, H, N
Length: 235 amino acids
Theoretical weight: 25.45 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
UniProt:

Canonical: S6B291 (Residues: 20-117, 118-123, 124-239; Coverage: 49%)

Sequence domains:

NIH45-46 single chain Fv Chains: D, I, O

Molecule details ›

Chains: D, I, O
Length: 241 amino acids
Theoretical weight: 26.3 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens