5vmj

X-ray diffraction
2.95Å resolution

Influenza hemagglutinin H1 mutant DH1E in complex with 3'SLN

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
PDBe Complex ID:
PDB-CPX-578035 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (5 distinct):
Hemagglutinin Chains: A, C, E
Molecule details ›
Chains: A, C, E
Length: 326 amino acids
Theoretical weight: 35.95 KDa
Source organism: Influenza A virus (A/New_York/1/18(H1N1))
Expression system: unidentified baculovirus
UniProt:
  • Canonical: Q9WFX4 (Residues: 18-344; Coverage: 80%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains:
Hemagglutinin HA2 chain Chains: B, D, F
Molecule details ›
Chains: B, D, F
Length: 191 amino acids
Theoretical weight: 21.73 KDa
Source organism: Influenza A virus (A/Brevig Mission/1/1918(H1N1))
Expression system: unidentified baculovirus
UniProt:
  • Canonical: Q9WFX3 (Residues: 345-529; Coverage: 34%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains: Hemagglutinin Ectodomain; Chain B

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA
Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: GAL, SIA
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-F
Spacegroup: P21
Unit cell:
a: 95.94Å b: 81.05Å c: 120.95Å
α: 90° β: 91.13° γ: 90°
R-values:
R R work R free
0.21 0.208 0.248
Expression system: unidentified baculovirus