› 5a02

X-ray diffraction
2Å resolution

Crystal structure of aldose-aldose oxidoreductase from Caulobacter crescentus complexed with glycerol

Released:
DOI: 10.2210/pdb5a02/pdb
PDB entry 5a02 coloured by chain, front view.
PDB entry 5a02 coloured by chain, side view.
PDB entry 5a02 coloured by chain, top view.
Source organism: Caulobacter vibrioides CB15
Primary publication:
Structure and function of Caulobacter crescentus aldose-aldose oxidoreductase.
Taberman H, Andberg M, Koivula A, Hakulinen N, Penttilä M, Rouvinen J, Parkkinen T
Biochem J 472 297-307 (2015)
PMID: 26438878

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-189501 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Glucose-fructose oxidoreductase Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 339 amino acids
Theoretical weight: 37.29 KDa
Source organism: Caulobacter vibrioides CB15
Expression system: Saccharomyces cerevisiae
UniProt:
  • Canonical: Q9A8X3 (Residues: 28-366; Coverage: 93%)
Gene name: CC_1225
Sequence domains:
Structure domains:

Ligands and Environments

3 bound ligands:
Ligand NAP 6 x NAP
Ligand GOL 16 x GOL
Ligand SO4 8 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I03
Spacegroup: P21
Unit cell:
a: 101.31Å b: 153.59Å c: 108.01Å
α: 90° β: 109.85° γ: 90°
R-values:
R R work R free
0.161 0.16 0.187
Expression system: Saccharomyces cerevisiae

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Citations

2 citation in other articles

Identification, functional characterization, and crystal structure determination of bacterial levoglucosan dehydrogenase.
Sugiura et al. (2018)
1 more

4 mentions without citation

Structural and functional features of the NAD(P) dependent Gfo/Idh/MocA protein family oxidoreductases.
Taberman et al. (2016)
3 more