Articles - 5dw3 mentioned but not cited (3)
- Directed evolution of the tryptophan synthase β-subunit for stand-alone function recapitulates allosteric activation. Buller AR, Brinkmann-Chen S, Romney DK, Herger M, Murciano-Calles J, Arnold FH. Proc Natl Acad Sci U S A 112 14599-14604 (2015)
- Tryptophan Synthase Uses an Atypical Mechanism To Achieve Substrate Specificity. Buller AR, van Roye P, Murciano-Calles J, Arnold FH. Biochemistry 55 7043-7046 (2016)
- Engineered Tryptophan Synthase Balances Equilibrium Effects and Fast Dynamic Effects. Schafer JW, Chen X, Schwartz SD. ACS Catal 12 913-922 (2022)
Reviews citing this publication (13)
- Tryptophan Synthase: Biocatalyst Extraordinaire. Watkins-Dulaney E, Straathof S, Arnold F. Chembiochem 22 5-16 (2021)
- Biocatalysis: Enzymatic Synthesis for Industrial Applications. Wu S, Snajdrova R, Moore JC, Baldenius K, Bornscheuer UT. Angew Chem Int Ed Engl 60 88-119 (2021)
- In-Silico Bioprospecting: Finding Better Enzymes. Kamble A, Srinivasan S, Singh H. Mol Biotechnol 61 53-59 (2019)
- A mechanistic view of enzyme evolution. Yang G, Miton CM, Tokuriki N. Protein Sci 29 1724-1747 (2020)
- Engineering enzymes for noncanonical amino acid synthesis. Almhjell PJ, Boville CE, Arnold FH. Chem Soc Rev 47 8980-8997 (2018)
- Structural Basis for Allostery in PLP-dependent Enzymes. Tran JU, Brown BL. Front Mol Biosci 9 884281 (2022)
- Aldehyde catalysis - from simple aldehydes to artificial enzymes. Yuan Z, Liao J, Jiang H, Cao P, Li Y. RSC Adv 10 35433-35448 (2020)
- Allosteric regulation of substrate channeling: Salmonella typhimurium tryptophan synthase. Ghosh RK, Hilario E, Chang CA, Mueller LJ, Dunn MF. Front Mol Biosci 9 923042 (2022)
- AlphaFold2 and Deep Learning for Elucidating Enzyme Conformational Flexibility and Its Application for Design. Casadevall G, Duran C, Osuna S. JACS Au 3 1554-1562 (2023)
- Engineering Allostery into Proteins. Gorman SD, D'Amico RN, Winston DS, Boehr DD. Adv Exp Med Biol 1163 359-384 (2019)
- Loop dynamics and the evolution of enzyme activity. Corbella M, Pinto GP, Kamerlin SCL. Nat Rev Chem (2023)
- Overview on Multienzymatic Cascades for the Production of Non-canonical α-Amino Acids. Martínez-Rodríguez S, Torres JM, Sánchez P, Ortega E. Front Bioeng Biotechnol 8 887 (2020)
- Tinker, Tailor, Soldier, Spy: The Diverse Roles That Fluorine Can Play within Amino Acid Side Chains. Miles SA, Nillama JA, Hunter L. Molecules 28 6192 (2023)
Articles citing this publication (53)
- Synthesis of β-Branched Tryptophan Analogues Using an Engineered Subunit of Tryptophan Synthase. Herger M, van Roye P, Romney DK, Brinkmann-Chen S, Buller AR, Arnold FH. J. Am. Chem. Soc. 138 8388-8391 (2016)
- A Panel of TrpB Biocatalysts Derived from Tryptophan Synthase through the Transfer of Mutations that Mimic Allosteric Activation. Murciano-Calles J, Romney DK, Brinkmann-Chen S, Buller AR, Arnold FH. Angew. Chem. Int. Ed. Engl. 55 11577-11581 (2016)
- Nitroalkanes as Versatile Nucleophiles for Enzymatic Synthesis of Noncanonical Amino Acids. Romney DK, Sarai NS, Arnold FH. ACS Catal 9 8726-8730 (2019)
- Unlocking Reactivity of TrpB: A General Biocatalytic Platform for Synthesis of Tryptophan Analogues. Romney DK, Murciano-Calles J, Wehrmüller JE, Arnold FH. J. Am. Chem. Soc. 139 10769-10776 (2017)
- Biomolecular QM/MM Simulations: What Are Some of the "Burning Issues"? Cui Q, Pal T, Xie L. J Phys Chem B 125 689-702 (2021)
- Site-Selective Deuteration of Amino Acids through Dual-Protein Catalysis. Doyon TJ, Buller AR. J Am Chem Soc 144 7327-7336 (2022)
- Directed Evolution Mimics Allosteric Activation by Stepwise Tuning of the Conformational Ensemble. Buller AR, van Roye P, Cahn JKB, Scheele RA, Herger M, Arnold FH. J. Am. Chem. Soc. 140 7256-7266 (2018)
- Sonogashira diversification of unprotected halotryptophans, halotryptophan containing tripeptides; and generation of a new to nature bromo-natural product and its diversification in water. Corr MJ, Sharma SV, Pubill-Ulldemolins C, Bown RT, Poirot P, Smith DRM, Cartmell C, Abou Fayad A, Goss RJM. Chem Sci 8 2039-2046 (2017)
- Tailoring Tryptophan Synthase TrpB for Selective Quaternary Carbon Bond Formation. Dick M, Sarai NS, Martynowycz MW, Gonen T, Arnold FH. J Am Chem Soc 141 19817-19822 (2019)
- Generation of a Stand-Alone Tryptophan Synthase α-Subunit by Mimicking an Evolutionary Blueprint. Schupfner M, Busch F, Wysocki VH, Sterner R. Chembiochem 20 2747-2751 (2019)
- Inhibiting mycobacterial tryptophan synthase by targeting the inter-subunit interface. Abrahams KA, Cox JAG, Fütterer K, Rullas J, Ortega-Muro F, Loman NJ, Moynihan PJ, Pérez-Herrán E, Jiménez E, Esquivias J, Barros D, Ballell L, Alemparte C, Besra GS. Sci Rep 7 9430 (2017)
- Allosteric inhibitors of Mycobacterium tuberculosis tryptophan synthase. Michalska K, Chang C, Maltseva NI, Jedrzejczak R, Robertson GT, Gusovsky F, McCarren P, Schreiber SL, Nag PP, Joachimiak A. Protein Sci 29 779-788 (2020)
- Broadening the scope of biocatalytic C-C bond formation. Zetzsche LE, Narayan ARH. Nat Rev Chem 4 334-346 (2020)
- Direct Enzymatic Synthesis of a Deep-Blue Fluorescent Noncanonical Amino Acid from Azulene and Serine. Watkins EJ, Almhjell PJ, Arnold FH. Chembiochem 21 80-83 (2020)
- Engineered Biosynthesis of β-Alkyl Tryptophan Analogues. Boville CE, Scheele RA, Koch P, Brinkmann-Chen S, Buller AR, Arnold FH. Angew. Chem. Int. Ed. Engl. 57 14764-14768 (2018)
- Improved Synthesis of 4-Cyanotryptophan and Other Tryptophan Analogues in Aqueous Solvent Using Variants of TrpB from Thermotoga maritima. Boville CE, Romney DK, Almhjell PJ, Sieben M, Arnold FH. J. Org. Chem. 83 7447-7452 (2018)
- Mutation of βGln114 to Ala Alters the Stabilities of Allosteric States in Tryptophan Synthase Catalysis. Ghosh RK, Hilario E, Liu V, Wang Y, Niks D, Holmes JB, Sakhrani VV, Mueller LJ, Dunn MF. Biochemistry 60 3173-3186 (2021)
- Catalytically impaired TrpA subunit of tryptophan synthase from Chlamydia trachomatis is an allosteric regulator of TrpB. Michalska K, Wellington S, Maltseva N, Jedrzejczak R, Selem-Mojica N, Rosas-Becerra LR, Barona-Gómez F, Hung DT, Joachimiak A. Protein Sci 30 1904-1918 (2021)
- Substitution of a Surface-Exposed Residue Involved in an Allosteric Network Enhances Tryptophan Synthase Function in Cells. D'Amico RN, Bosken YK, O'Rourke KF, Murray AM, Admasu W, Chang CA, Boehr DD. Front Mol Biosci 8 679915 (2021)
- l-Threonine Transaldolase Activity Is Enabled by a Persistent Catalytic Intermediate. Kumar P, Meza A, Ellis JM, Carlson GA, Bingman CA, Buller AR. ACS Chem Biol 16 86-95 (2021)
- Allosteric Activation Shifts the Rate-Limiting Step in a Short-Form ATP Phosphoribosyltransferase. Fisher G, Thomson CM, Stroek R, Czekster CM, Hirschi JS, da Silva RG. Biochemistry 57 4357-4367 (2018)
- Analysis of allosteric communication in a multienzyme complex by ancestral sequence reconstruction. Schupfner M, Straub K, Busch F, Merkl R, Sterner R. Proc Natl Acad Sci U S A 117 346-354 (2020)
- Biocatalytic Production of Psilocybin and Derivatives in Tryptophan Synthase-Enhanced Reactions. Blei F, Baldeweg F, Fricke J, Hoffmeister D. Chemistry (2018)
- De novo biosynthesis of a nonnatural cobalt porphyrin cofactor in E. coli and incorporation into hemoproteins. Perkins LJ, Weaver BR, Buller AR, Burstyn JN. Proc Natl Acad Sci U S A 118 e2017625118 (2021)
- Estimating conformational heterogeneity of tryptophan synthase with a template-based Alphafold2 approach. Casadevall G, Duran C, Estévez-Gay M, Osuna S. Protein Sci 31 e4426 (2022)
- In vivo hypermutation and continuous evolution. Molina RS, Rix G, Mengiste AA, Alvarez B, Seo D, Chen H, Hurtado J, Zhang Q, Donato García-García J, Heins ZJ, Almhjell PJ, Arnold FH, Khalil AS, Hanson AD, Dueber JE, Schaffer DV, Chen F, Kim S, Ángel Fernández L, Shoulders MD, Liu CC. Nat Rev Methods Primers 2 37 (2022)
- Investigation of β-Substitution Activity of O-Acetylserine Sulfhydrolase from Citrullus vulgaris. Smith JL, Harrison IM, Bingman CA, Buller AR. Chembiochem 23 e202200157 (2022)
- Stereoselective amino acid synthesis by synergistic photoredox-pyridoxal radical biocatalysis. Cheng L, Li D, Mai BK, Bo Z, Cheng L, Liu P, Yang Y. Science 381 444-451 (2023)
- In Silico Identification and Experimental Validation of Distal Activity-Enhancing Mutations in Tryptophan Synthase. Maria-Solano MA, Kinateder T, Iglesias-Fernández J, Sterner R, Osuna S. ACS Catal 11 13733-13743 (2021)
- A small-molecule chemical interface for molecular programs. Shenshin VA, Lescanne C, Gines G, Rondelez Y. Nucleic Acids Res 49 7765-7774 (2021)
- Allosteric rescue of catalytically impaired ATP phosphoribosyltransferase variants links protein dynamics to active-site electrostatic preorganisation. Fisher G, Corbella M, Alphey MS, Nicholson J, Read BJ, Kamerlin SCL, da Silva RG. Nat Commun 13 7607 (2022)
- Asymmetric Alkylation of Ketones Catalyzed by Engineered TrpB. Watkins-Dulaney EJ, Dunham NP, Straathof S, Turi S, Arnold FH, Buller AR. Angew Chem Int Ed Engl 60 21412-21417 (2021)
- Chemoenzymatic Synthesis of Indole-Containing Acyloin Derivatives. Alrashdi S, Casolari F, Alabed A, Kyeremeh K, Deng H. Molecules 28 354 (2023)
- Clinical Persistence of Chlamydia trachomatis Sexually Transmitted Strains Involves Novel Mutations in the Functional αββα Tetramer of the Tryptophan Synthase Operon. Somboonna N, Ziklo N, Ferrin TE, Hyuk Suh J, Dean D. MBio 10 (2019)
- Conservation of the structure and function of bacterial tryptophan synthases. Michalska K, Gale J, Joachimiak G, Chang C, Hatzos-Skintges C, Nocek B, Johnston SE, Bigelow L, Bajrami B, Jedrzejczak RP, Wellington S, Hung DT, Nag PP, Fisher SL, Endres M, Joachimiak A. IUCrJ 6 649-664 (2019)
- Engineered Biocatalytic Synthesis of β-N-Substituted-α-Amino Acids. Villalona J, Higgins PM, Buller AR. Angew Chem Int Ed Engl 62 e202311189 (2023)
- Engineering Improves Enzymatic Synthesis of L-Tryptophan by Tryptophan Synthase from Escherichia coli. Xu L, Han F, Dong Z, Wei Z. Microorganisms 8 (2020)
- Facile in Vitro Biocatalytic Production of Diverse Tryptamines. McDonald AD, Perkins LJ, Buller AR. Chembiochem 20 1939-1944 (2019)
- Finding Superior Biocatalysts via Homolog Screening. Jiang Y, Renata H. Chem Catal 2 2471-2480 (2022)
- Functional tunability from a distance: Rheostat positions influence allosteric coupling between two distant binding sites. Wu T, Swint-Kruse L, Fenton AW. Sci Rep 9 16957 (2019)
- Heck Diversification of Indole-Based Substrates under Aqueous Conditions: From Indoles to Unprotected Halo-tryptophans and Halo-tryptophans in Natural Product Derivatives. Pubill-Ulldemolins C, Sharma SV, Cartmell C, Zhao J, Cárdenas P, Goss RJM. Chemistry 25 10866-10875 (2019)
- Improving the Activity of Tryptophan Synthetase via a Nucleic Acid Scaffold. Wang Y, Wang X, Niu S, Cheng W, Liu X, Min Y, Qiu Y, Ma L, Rao B, Zhu L. Molecules 28 7272 (2023)
- Light-Regulation of Tryptophan Synthase by Combining Protein Design and Enzymology. Kneuttinger AC, Zwisele S, Straub K, Bruckmann A, Busch F, Kinateder T, Gaim B, Wysocki VH, Merkl R, Sterner R. Int J Mol Sci 20 (2019)
- Metal-responsive regulation of enzyme catalysis using genetically encoded chemical switches. Zubi YS, Seki K, Li Y, Hunt AC, Liu B, Roux B, Jewett MC, Lewis JC. Nat Commun 13 1864 (2022)
- Modular control of l-tryptophan isotopic substitution via an efficient biosynthetic cascade. Thompson CM, McDonald AD, Yang H, Cavagnero S, Buller AR. Org Biomol Chem 18 4189-4192 (2020)
- Multiplexed Assessment of Promiscuous Non-Canonical Amino Acid Synthase Activity in a Pyridoxal Phosphate-Dependent Protein Family. Zmich A, Perkins LJ, Bingman C, Acheson JF, Buller AR. ACS Catal 13 11644-11655 (2023)
- Resistance of Mycobacterium tuberculosis to indole 4-carboxamides occurs through alterations in drug metabolism and tryptophan biosynthesis. Libardo MDJ, Duncombe CJ, Green SR, Wyatt PG, Thompson S, Ray PC, Ioerger TR, Oh S, Goodwin MB, Boshoff HIM, Barry CE. Cell Chem Biol 28 1180-1191.e20 (2021)
- SPARC: Structural properties associated with residue constraints. Neuwald AF, Yang H, Tracy Nixon B. Comput Struct Biotechnol J 20 1702-1715 (2022)
- Scalable continuous evolution for the generation of diverse enzyme variants encompassing promiscuous activities. Rix G, Watkins-Dulaney EJ, Almhjell PJ, Boville CE, Arnold FH, Liu CC. Nat Commun 11 5644 (2020)
- Structural plasticity enables evolution and innovation of RuBisCO assemblies. Liu AK, Pereira JH, Kehl AJ, Rosenberg DJ, Orr DJ, Chu SKS, Banda DM, Hammel M, Adams PD, Siegel JB, Shih PM. Sci Adv 8 eadc9440 (2022)
- Substrate multiplexed protein engineering facilitates promiscuous biocatalytic synthesis. McDonald AD, Higgins PM, Buller AR. Nat Commun 13 5242 (2022)
- Translational Detection of Indole by Complementary Cell-free Protein Synthesis Assay. Lee YJ, Lee S, Kim DM. Front Bioeng Biotechnol 10 900162 (2022)
- l-Serine Biosensor-Controlled Fermentative Production of l-Tryptophan Derivatives by Corynebacterium glutamicum. Ferrer L, Elsaraf M, Mindt M, Wendisch VF. Biology (Basel) 11 744 (2022)