› 5e7h

X-ray diffraction
1.57Å resolution

Crystal structure of domains CD (residues 230-489) of Bacova_02650

Released:
DOI: 10.2210/pdb5e7h/pdb
PDB entry 5e7h coloured by chain, front view.
PDB entry 5e7h coloured by chain, side view.
PDB entry 5e7h coloured by chain, top view.
Source organism: Bacteroides ovatus ATCC 8483
Primary publication:
Molecular Dissection of Xyloglucan Recognition in a Prominent Human Gut Symbiont.
Tauzin AS, Kwiatkowski KJ, Orlovsky NI, Smith CJ, Creagh AL, Haynes CA, Wawrzak Z, Brumer H, Koropatkin NM
OpenAccess logo mBio 7 e02134-15 (2016)
PMID: 27118585

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-108317 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
IPT/TIG domain-containing protein BACOVA_02650 Chain: A
Molecule details ›
Chain: A
Length: 260 amino acids
Theoretical weight: 28.05 KDa
Source organism: Bacteroides ovatus ATCC 8483
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A7LXT4 (Residues: 230-489; Coverage: 56%)
Gene name: BACOVA_02650
Sequence domains:

Ligands and Environments

3 bound ligands:
Ligand FMT 5 x FMT
Ligand ACT 2 x ACT
Ligand NA 2 x NA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-F
Spacegroup: P6122
Unit cell:
a: 87.09Å b: 87.09Å c: 201.56Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.157 0.156 0.171
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

8 review citations

Introduction to the human gut microbiota.
Thursby et al. (2017)
7 more

1 mention without citation

Molecular Dissection of Xyloglucan Recognition in a Prominent Human Gut Symbiont.
Tauzin et al. (2016)