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RNC in complex with a translocating SecYEG

Source organism: Escherichia coli
Biochemical function: structural constituent of ribosome
Biological process: translation
Cellular component: ribonucleoprotein complex

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GO terms

Sequence families

Pfam Protein families (Pfam)
PF00347
Domain description: Ribosomal protein L6
Occurring in:
  1. Large ribosomal subunit protein uL6
The deposited structure of PDB entry 5gae contains 2 copies of Pfam domain PF00347 (Ribosomal protein L6) in Large ribosomal subunit protein uL6. Showing 2 copies in chain G.

PF00584
Domain description: SecE/Sec61-gamma subunits of protein translocation complex
Occurring in:
  1. Protein translocase subunit SecE
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00584 (SecE/Sec61-gamma subunits of protein translocation complex) in Protein translocase subunit SecE. Showing 1 copy in chain HA [auth h].

PF00344
Domain description: SecY
Occurring in:
  1. Protein translocase subunit SecY
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00344 (SecY) in Protein translocase subunit SecY. Showing 1 copy in chain GA [auth g].

PF00444
Domain description: Ribosomal protein L36
Occurring in:
  1. Large ribosomal subunit protein bL36A
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00444 (Ribosomal protein L36) in Large ribosomal subunit protein bL36A. Showing 1 copy in chain FA [auth f].

PF01632
Domain description: Ribosomal protein L35
Occurring in:
  1. Large ribosomal subunit protein bL35
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF01632 (Ribosomal protein L35) in Large ribosomal subunit protein bL35. Showing 1 copy in chain EA [auth e].

PF00468
Domain description: Ribosomal protein L34
Occurring in:
  1. Large ribosomal subunit protein bL34
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00468 (Ribosomal protein L34) in Large ribosomal subunit protein bL34. Showing 1 copy in chain DA [auth d].

PF00471
Domain description: Ribosomal protein L33
Occurring in:
  1. Large ribosomal subunit protein bL33
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00471 (Ribosomal protein L33) in Large ribosomal subunit protein bL33. Showing 1 copy in chain CA [auth c].

PF01783
Domain description: Ribosomal L32p protein family
Occurring in:
  1. Large ribosomal subunit protein bL32
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF01783 (Ribosomal L32p protein family) in Large ribosomal subunit protein bL32. Showing 1 copy in chain BA [auth b].

PF00327
Domain description: Ribosomal protein L30p/L7e
Occurring in:
  1. Large ribosomal subunit protein uL30
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00327 (Ribosomal protein L30p/L7e) in Large ribosomal subunit protein uL30. Showing 1 copy in chain AA [auth a].

PF00831
Domain description: Ribosomal L29 protein
Occurring in:
  1. Large ribosomal subunit protein uL29
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00831 (Ribosomal L29 protein) in Large ribosomal subunit protein uL29. Showing 1 copy in chain Z.

PF00830
Domain description: Ribosomal L28 family
Occurring in:
  1. Large ribosomal subunit protein bL28
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00830 (Ribosomal L28 family) in Large ribosomal subunit protein bL28. Showing 1 copy in chain Y.

PF01016
Domain description: Ribosomal L27 protein
Occurring in:
  1. Large ribosomal subunit protein bL27
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF01016 (Ribosomal L27 protein) in Large ribosomal subunit protein bL27. Showing 1 copy in chain X.

PF01386
Domain description: Ribosomal L25p family
Occurring in:
  1. Large ribosomal subunit protein bL25
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF01386 (Ribosomal L25p family) in Large ribosomal subunit protein bL25. Showing 1 copy in chain W.

PF17136
Domain description: Ribosomal proteins 50S L24/mitochondrial 39S L24
Occurring in:
  1. Large ribosomal subunit protein uL24
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF17136 (Ribosomal proteins 50S L24/mitochondrial 39S L24) in Large ribosomal subunit protein uL24. Showing 1 copy in chain V.

PF00467
Domain description: KOW motif
Occurring in:
  1. Large ribosomal subunit protein uL24
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00467 (KOW motif) in Large ribosomal subunit protein uL24. Showing 1 copy in chain V.

PF00276
Domain description: Ribosomal protein L23
Occurring in:
  1. Large ribosomal subunit protein uL23
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00276 (Ribosomal protein L23) in Large ribosomal subunit protein uL23. Showing 1 copy in chain U.

PF00237
Domain description: Ribosomal protein L22p/L17e
Occurring in:
  1. Large ribosomal subunit protein uL22
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00237 (Ribosomal protein L22p/L17e) in Large ribosomal subunit protein uL22. Showing 1 copy in chain T.

PF00829
Domain description: Ribosomal prokaryotic L21 protein
Occurring in:
  1. Large ribosomal subunit protein bL21
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00829 (Ribosomal prokaryotic L21 protein) in Large ribosomal subunit protein bL21. Showing 1 copy in chain S.

PF00453
Domain description: Ribosomal protein L20
Occurring in:
  1. Large ribosomal subunit protein bL20
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00453 (Ribosomal protein L20) in Large ribosomal subunit protein bL20. Showing 1 copy in chain R.

PF01245
Domain description: Ribosomal protein L19
Occurring in:
  1. Large ribosomal subunit protein bL19
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF01245 (Ribosomal protein L19) in Large ribosomal subunit protein bL19. Showing 1 copy in chain Q.

PF00861
Domain description: Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
Occurring in:
  1. Large ribosomal subunit protein uL18
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00861 (Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast) in Large ribosomal subunit protein uL18. Showing 1 copy in chain P.

PF01196
Domain description: Ribosomal protein L17
Occurring in:
  1. Large ribosomal subunit protein bL17
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF01196 (Ribosomal protein L17) in Large ribosomal subunit protein bL17. Showing 1 copy in chain O.

PF00252
Domain description: Ribosomal protein L16p/L10e
Occurring in:
  1. Large ribosomal subunit protein uL16
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00252 (Ribosomal protein L16p/L10e) in Large ribosomal subunit protein uL16. Showing 1 copy in chain N.

PF00828
Domain description: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
Occurring in:
  1. Large ribosomal subunit protein uL15
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00828 (Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A) in Large ribosomal subunit protein uL15. Showing 1 copy in chain M.

PF00238
Domain description: Ribosomal protein L14p/L23e
Occurring in:
  1. Large ribosomal subunit protein uL14
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00238 (Ribosomal protein L14p/L23e) in Large ribosomal subunit protein uL14. Showing 1 copy in chain L.

PF00572
Domain description: Ribosomal protein L13
Occurring in:
  1. Large ribosomal subunit protein uL13
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00572 (Ribosomal protein L13) in Large ribosomal subunit protein uL13. Showing 1 copy in chain K.

PF00298
Domain description: Ribosomal protein L11, RNA binding domain
Occurring in:
  1. Large ribosomal subunit protein uL11
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00298 (Ribosomal protein L11, RNA binding domain) in Large ribosomal subunit protein uL11. Showing 1 copy in chain J.

PF03946
Domain description: Ribosomal protein L11, N-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL11
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF03946 (Ribosomal protein L11, N-terminal domain) in Large ribosomal subunit protein uL11. Showing 1 copy in chain J (this domain is out of the observed residue ranges!).

PF00466
Domain description: Ribosomal protein L10
Occurring in:
  1. Large ribosomal subunit protein uL10
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00466 (Ribosomal protein L10) in Large ribosomal subunit protein uL10. Showing 1 copy in chain I.

PF03948
Domain description: Ribosomal protein L9, C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein bL9
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF03948 (Ribosomal protein L9, C-terminal domain) in Large ribosomal subunit protein bL9. Showing 1 copy in chain H.

PF01281
Domain description: Ribosomal protein L9, N-terminal domain
Occurring in:
  1. Large ribosomal subunit protein bL9
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF01281 (Ribosomal protein L9, N-terminal domain) in Large ribosomal subunit protein bL9. Showing 1 copy in chain H.

PF00673
Domain description: ribosomal L5P family C-terminus
Occurring in:
  1. Large ribosomal subunit protein uL5
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00673 (ribosomal L5P family C-terminus) in Large ribosomal subunit protein uL5. Showing 1 copy in chain F.

PF00281
Domain description: Ribosomal protein L5
Occurring in:
  1. Large ribosomal subunit protein uL5
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00281 (Ribosomal protein L5) in Large ribosomal subunit protein uL5. Showing 1 copy in chain F.

PF00573
Domain description: Ribosomal protein L4/L1 family
Occurring in:
  1. Large ribosomal subunit protein uL4
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00573 (Ribosomal protein L4/L1 family) in Large ribosomal subunit protein uL4. Showing 1 copy in chain E.

PF00297
Domain description: Ribosomal protein L3
Occurring in:
  1. Large ribosomal subunit protein uL3
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00297 (Ribosomal protein L3) in Large ribosomal subunit protein uL3. Showing 1 copy in chain D.

PF03947
Domain description: Ribosomal Proteins L2, C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL2
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF03947 (Ribosomal Proteins L2, C-terminal domain) in Large ribosomal subunit protein uL2. Showing 1 copy in chain C.

PF00181
Domain description: Ribosomal Proteins L2, RNA binding domain
Occurring in:
  1. Large ribosomal subunit protein uL2
The deposited structure of PDB entry 5gae contains 1 copy of Pfam domain PF00181 (Ribosomal Proteins L2, RNA binding domain) in Large ribosomal subunit protein uL2. Showing 1 copy in chain C.

InterPro InterPro annotations
IPR005813
Domain description: Large ribosomal subunit protein bL20
Occurring in:
  1. Large ribosomal subunit protein bL20
IPR001684
Domain description: Large ribosomal subunit protein bL27
Occurring in:
  1. Large ribosomal subunit protein bL27
IPR001857
Domain description: Large ribosomal subunit protein bL19
Occurring in:
  1. Large ribosomal subunit protein bL19
IPR000114
Domain description: Large ribosomal subunit protein uL16, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL16
IPR005807
Domain description: SecE subunit of protein translocation complex, bacterial-like
Occurring in:
  1. Protein translocase subunit SecE
IPR001706
Domain description: Large ribosomal subunit protein bL35
Occurring in:
  1. Large ribosomal subunit protein bL35
IPR005996
Domain description: Large ribosomal subunit protein uL30, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR005822
Domain description: Large ribosomal subunit protein uL13
Occurring in:
  1. Large ribosomal subunit protein uL13
IPR019906
Domain description: Large ribosomal subunit protein uL6, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL6
IPR002208
Domain description: SecY/SEC61-alpha family
Occurring in:
  1. Protein translocase subunit SecY
IPR000456
Domain description: Large ribosomal subunit protein bL17
Occurring in:
  1. Large ribosomal subunit protein bL17
IPR000911
Domain description: Ribosomal protein uL11
Occurring in:
  1. Large ribosomal subunit protein uL11
IPR001901
Domain description: Protein translocase complex, SecE/Sec61-gamma subunit
Occurring in:
  1. Protein translocase subunit SecE
IPR001705
Domain description: Large ribosomal subunit protein bL33
Occurring in:
  1. Large ribosomal subunit protein bL33
IPR002677
Domain description: Large ribosomal subunit protein bL32
Occurring in:
  1. Large ribosomal subunit protein bL32
IPR001854
Domain description: Large ribosomal subunit protein uL29
Occurring in:
  1. Large ribosomal subunit protein uL29
IPR003256
Domain description: Large ribosomal subunit protein uL24
Occurring in:
  1. Large ribosomal subunit protein uL24
IPR013025
Domain description: Large ribosomal subunit protein uL23-like
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR013005
Domain description: Large ribosomal subunit protein uL4-like
Occurring in:
  1. Large ribosomal subunit protein uL4
IPR019927
Domain description: Large ribosomal subunit protein uL3, bacterial/organelle-type
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR008991
Domain description: Translation protein SH3-like domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL2
  2. Large ribosomal subunit protein bL19
  3. Large ribosomal subunit protein uL24
IPR002171
Domain description: Large ribosomal subunit protein uL2
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR030659
Domain description: SecY conserved site
Occurring in:
  1. Protein translocase subunit SecY
IPR023201
Domain description: SecY domain superfamily
Occurring in:
  1. Protein translocase subunit SecY
IPR000473
Domain description: Large ribosomal subunit protein bL36
Occurring in:
  1. Large ribosomal subunit protein bL36A
IPR037229
Domain description: Large ribosomal subunit protein bL35 superfamily
Occurring in:
  1. Large ribosomal subunit protein bL35
IPR011332
Domain description: Zinc-binding ribosomal protein
Occurring in:
  1. Large ribosomal subunit protein bL32
  2. Large ribosomal subunit protein bL33
IPR036919
Domain description: Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR026569
Domain description: Large ribosomal subunit protein bL28
Occurring in:
  1. Large ribosomal subunit protein bL28
IPR001383
Domain description: Large ribosomal subunit protein bL28, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein bL28
IPR029751
Domain description: Large ribosomal subunit protein bL25, L25 domain
Occurring in:
  1. Large ribosomal subunit protein bL25
IPR005824
Domain description: KOW
Occurring in:
  1. Large ribosomal subunit protein uL24
IPR001063
Domain description: Large ribosomal subunit protein uL22
Occurring in:
  1. Large ribosomal subunit protein uL22
IPR036394
Domain description: Ribosomal protein uL22 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL22
IPR005727
Domain description: Large ribosomal subunit protein uL22, bacterial/chloroplast-type
Occurring in:
  1. Large ribosomal subunit protein uL22
IPR001787
Domain description: Large ribosomal subunit protein bL21
Occurring in:
  1. Large ribosomal subunit protein bL21
IPR035566
Domain description: Ribosomal protein bL20, C-terminal
Occurring in:
  1. Large ribosomal subunit protein bL20
IPR004389
Domain description: Large ribosomal subunit protein uL18, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL18
IPR005484
Domain description: Large ribosomal subunit protein uL18
Occurring in:
  1. Large ribosomal subunit protein uL18
IPR036373
Domain description: Large ribosomal subunit protein bL17 superfamily
Occurring in:
  1. Large ribosomal subunit protein bL17
IPR020798
Domain description: Large ribosomal subunit protein uL16, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL16
IPR036920
Domain description: Large ribosomal subunit protein uL16 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL16
IPR005749
Domain description: Large ribosomal subunit protein uL15, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR036853
Domain description: Large ribosomal subunit protein uL14 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL14
IPR000218
Domain description: Large ribosomal subunit protein uL14
Occurring in:
  1. Large ribosomal subunit protein uL14
IPR036899
Domain description: Large ribosomal subunit protein uL13 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL13
IPR036769
Domain description: Large ribosomal subunit protein uL11, C-terminal domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL11
IPR036796
Domain description: Large ribosomal subunit protein uL11, N-terminal domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL11
IPR047865
Domain description: Large ribosomal subunit protein uL10, bacterial type
Occurring in:
  1. Large ribosomal subunit protein uL10
IPR043141
Domain description: Large ribosomal subunit protein uL10-like domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL10
IPR036791
Domain description: Large ribosomal subunit protein bL9, C-terminal domain superfamily
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR020070
Domain description: Large ribosomal subunit protein bL9, N-terminal
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR020040
Domain description: Large ribosomal subunit protein uL6, alpha-beta domain
Occurring in:
  1. Large ribosomal subunit protein uL6
IPR036789
Domain description: Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL6
IPR022803
Domain description: Large ribosomal subunit protein uL5 domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL5
IPR002132
Domain description: Large ribosomal subunit protein uL5
Occurring in:
  1. Large ribosomal subunit protein uL5
IPR023574
Domain description: Large ribosomal subunit protein uL4 domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL4
IPR022669
Domain description: Large ribosomal subunit protein uL2, C-terminal
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR014722
Domain description: Large ribosomal subunit protein uL2, domain 2
Occurring in:
  1. Large ribosomal subunit protein uL2
  2. Large ribosomal subunit protein uL24
IPR012340
Domain description: Nucleic acid-binding, OB-fold
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR005880
Domain description: Large ribosomal subunit protein uL2, bacterial/organellar-type
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR038379
Domain description: SecE superfamily
Occurring in:
  1. Protein translocase subunit SecE
IPR026593
Domain description: Protein translocase subunit SecY
Occurring in:
  1. Protein translocase subunit SecY
IPR035977
Domain description: Large ribosomal subunit protein bL36 superfamily
Occurring in:
  1. Large ribosomal subunit protein bL36A
IPR018265
Domain description: Large ribosomal subunit protein bL35, conserved site
Occurring in:
  1. Large ribosomal subunit protein bL35
IPR021137
Domain description: Large ribosomal subunit protein bL35-like
Occurring in:
  1. Large ribosomal subunit protein bL35
IPR020939
Domain description: Large ribosomal subunit protein bL34, conserved site
Occurring in:
  1. Large ribosomal subunit protein bL34
IPR000271
Domain description: Large ribosomal subunit protein bL34
Occurring in:
  1. Large ribosomal subunit protein bL34
IPR018264
Domain description: Large ribosomal subunit protein bL33, conserved site
Occurring in:
  1. Large ribosomal subunit protein bL33
IPR038584
Domain description: Large ribosomal subunit protein bL33 superfamily
Occurring in:
  1. Large ribosomal subunit protein bL33
IPR044957
Domain description: Large ribosomal subunit protein bL32, bacterial type
Occurring in:
  1. Large ribosomal subunit protein bL32
IPR018038
Domain description: Large ribosomal subunit protein uL30, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR016082
Domain description: Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR018254
Domain description: Large ribosomal subunit protein uL29, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL29
IPR036049
Domain description: Large ribosomal subunit protein uL29 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL29
IPR037147
Domain description: Large ribosomal subunit protein bL28 superfamily
Occurring in:
  1. Large ribosomal subunit protein bL28
IPR034704
Domain description: Large ribosomal subunit protein bL28/bL31-like superfamily
Occurring in:
  1. Large ribosomal subunit protein bL28
IPR018261
Domain description: Large ribosomal subunit protein bL27, conserved site
Occurring in:
  1. Large ribosomal subunit protein bL27
IPR020055
Domain description: Ribosomal protein bL25, short-form
Occurring in:
  1. Large ribosomal subunit protein bL25
IPR020056
Domain description: Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal
Occurring in:
  1. Large ribosomal subunit protein bL25
IPR011035
Domain description: Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily
Occurring in:
  1. Large ribosomal subunit protein bL25
IPR041988
Domain description: Large ribosomal subunit protein uL24, KOW domain
Occurring in:
  1. Large ribosomal subunit protein uL24
IPR005825
Domain description: Large ribosomal subunit protein uL24, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL24
IPR001014
Domain description: Large ribosomal subunit protein uL23, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR012678
Domain description: Ribosomal protein uL23/eL15/eS24 core domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR012677
Domain description: Nucleotide-binding alpha-beta plait domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR018260
Domain description: Large ribosomal subunit protein uL22, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL22
IPR047867
Domain description: Large ribosomal subunit protein uL22, bacterial/organelle-type
Occurring in:
  1. Large ribosomal subunit protein uL22
IPR018258
Domain description: Large ribosomal subunit protein bL21, conserved site
Occurring in:
  1. Large ribosomal subunit protein bL21
IPR036164
Domain description: Large ribosomal subunit protein bL21-like superfamily
Occurring in:
  1. Large ribosomal subunit protein bL21
IPR028909
Domain description: Large ribosomal subunit protein bL21-like
Occurring in:
  1. Large ribosomal subunit protein bL21
IPR018257
Domain description: Large ribosomal subunit protein bL19, conserved site
Occurring in:
  1. Large ribosomal subunit protein bL19
IPR038657
Domain description: Large ribosomal subunit protein bL19 superfamily
Occurring in:
  1. Large ribosomal subunit protein bL19
IPR047859
Domain description: Large ribosomal subunit protein bL17, conserved site
Occurring in:
  1. Large ribosomal subunit protein bL17
IPR016180
Domain description: Large ribosomal subunit protein uL16 domain
Occurring in:
  1. Large ribosomal subunit protein uL16
IPR047873
Domain description: Large ribosomal subunit protein uL16
Occurring in:
  1. Large ribosomal subunit protein uL16
IPR001196
Domain description: Large ribosomal subunit protein uL15, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR021131
Domain description: Large ribosomal subunit protein uL15/eL18
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR036227
Domain description: Large ribosomal subunit protein uL15/eL18 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR030878
Domain description: Large ribosomal subunit protein uL15
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR019972
Domain description: Large ribosomal subunit protein uL14, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL14
IPR005745
Domain description: Large ribosomal subunit protein uL14, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL14
IPR023563
Domain description: Large ribosomal subunit protein uL13, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL13
IPR005823
Domain description: Large ribosomal subunit protein uL13, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL13
IPR020785
Domain description: Large ribosomal subunit protein uL11, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL11
IPR020783
Domain description: Large ribosomal subunit protein uL11, C-terminal
Occurring in:
  1. Large ribosomal subunit protein uL11
IPR020784
Domain description: Large ribosomal subunit protein uL11, N-terminal
Occurring in:
  1. Large ribosomal subunit protein uL11
IPR006519
Domain description: Large ribosomal subunit protein uL11, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL11
IPR002363
Domain description: Large ribosomal subunit protein uL10, conserved site, bacteria
Occurring in:
  1. Large ribosomal subunit protein uL10
IPR001790
Domain description: Large ribosomal subunit protein uL10
Occurring in:
  1. Large ribosomal subunit protein uL10
IPR022973
Domain description: Large ribosomal subunit protein uL10, bacterial
Occurring in:
  1. Large ribosomal subunit protein uL10
IPR020069
Domain description: Large ribosomal subunit protein bL9, C-terminal
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR036935
Domain description: Large ribosomal subunit protein bL9, N-terminal domain superfamily
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR020594
Domain description: Large ribosomal subunit protein bL9, bacteria/chloroplast
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR009027
Domain description: Large ribosomal subunit protein bL9/RNase H1, N-terminal
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR000244
Domain description: Large ribosomal subunit protein bL9
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR002358
Domain description: Large ribosomal subunit protein uL6, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL6
IPR000702
Domain description: Large ribosomal subunit protein uL6-like
Occurring in:
  1. Large ribosomal subunit protein uL6
IPR031309
Domain description: Large ribosomal subunit protein uL5, C-terminal
Occurring in:
  1. Large ribosomal subunit protein uL5
IPR020929
Domain description: Large ribosomal subunit protein uL5, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL5
IPR031310
Domain description: Large ribosomal subunit protein uL5, N-terminal
Occurring in:
  1. Large ribosomal subunit protein uL5
IPR020930
Domain description: Large ribosomal subunit protein uL5, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL5
IPR002136
Domain description: Large ribosomal subunit protein uL4
Occurring in:
  1. Large ribosomal subunit protein uL4
IPR019926
Domain description: Large ribosomal subunit protein uL3, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR000597
Domain description: Large ribosomal subunit protein uL3
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR009000
Domain description: Translation protein, beta-barrel domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR022671
Domain description: Large ribosomal subunit protein uL2, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR014726
Domain description: Large ribosomal subunit protein uL2, domain 3
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR022666
Domain description: Large ribosomal subunit protein uL2, RNA-binding domain
Occurring in:
  1. Large ribosomal subunit protein uL2

Structure domains

CATH CATH domains
3.90.930.12
Class: Alpha Beta
Architecture: Alpha-Beta Complex
Topology: Outer Surface Protein A; domain 3
Homology: Ribosomal protein L6, alpha-beta domain
Occurring in:
  1. Large ribosomal subunit protein uL6
The deposited structure of PDB entry 5gae contains 2 copies of CATH domain 3.90.930.12 (Outer Surface Protein A; domain 3) in Large ribosomal subunit protein uL6. Showing 2 copies in chain G.
1.10.287.3980
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Helix Hairpins
Homology: Helix Hairpins
Occurring in:
  1. Large ribosomal subunit protein bL34
The deposited structure of PDB entry 5gae contains 1 copy of CATH domain 1.10.287.3980 (Helix Hairpins) in Large ribosomal subunit protein bL34. Showing 1 copy in chain DA [auth d].
2.20.28.120
Class: Mainly Beta
Architecture: Single Sheet
Topology: Rubrerythrin, domain 2
Homology: Ribosomal protein L33
Occurring in:
  1. Large ribosomal subunit protein bL33
The deposited structure of PDB entry 5gae contains 1 copy of CATH domain 2.20.28.120 (Rubrerythrin, domain 2) in Large ribosomal subunit protein bL33. Showing 1 copy in chain CA [auth c].
3.30.1390.20
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Ribosomal Protein L30; Chain: A,
Homology: Ribosomal protein L30, ferredoxin-like fold domain
Occurring in:
  1. Large ribosomal subunit protein uL30
The deposited structure of PDB entry 5gae contains 1 copy of CATH domain 3.30.1390.20 (Ribosomal Protein L30; Chain: A,) in Large ribosomal subunit protein uL30. Showing 1 copy in chain AA [auth a].
2.40.240.10
Class: Mainly Beta
Architecture: Beta Barrel
Topology: Ribosomal Protein L25; Chain P
Homology: Ribosomal Protein L25; Chain P
Occurring in:
  1. Large ribosomal subunit protein bL25
The deposited structure of PDB entry 5gae contains 1 copy of CATH domain 2.40.240.10 (Ribosomal Protein L25; Chain P) in Large ribosomal subunit protein bL25. Showing 1 copy in chain W.
3.30.70.330
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Alpha-Beta Plaits
Homology: Alpha-Beta Plaits
Occurring in:
  1. Large ribosomal subunit protein uL23
The deposited structure of PDB entry 5gae contains 1 copy of CATH domain 3.30.70.330 (Alpha-Beta Plaits) in Large ribosomal subunit protein uL23. Showing 1 copy in chain U.
3.90.470.10
Class: Alpha Beta
Architecture: Alpha-Beta Complex
Topology: Ribosomal Protein L22; Chain A
Homology: Ribosomal protein L22/L17
Occurring in:
  1. Large ribosomal subunit protein uL22
The deposited structure of PDB entry 5gae contains 1 copy of CATH domain 3.90.470.10 (Ribosomal Protein L22; Chain A) in Large ribosomal subunit protein uL22. Showing 1 copy in chain T.
3.30.420.100
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Nucleotidyltransferase; domain 5
Homology: Nucleotidyltransferase; domain 5
Occurring in:
  1. Large ribosomal subunit protein uL18
The deposited structure of PDB entry 5gae contains 1 copy of CATH domain 3.30.420.100 (Nucleotidyltransferase; domain 5) in Large ribosomal subunit protein uL18. Showing 1 copy in chain P.
3.90.1030.10
Class: Alpha Beta
Architecture: Alpha-Beta Complex
Topology: 50s Ribosomal Protein L17; Chain: A,
Homology: Ribosomal protein L17
Occurring in:
  1. Large ribosomal subunit protein bL17
The deposited structure of PDB entry 5gae contains 1 copy of CATH domain 3.90.1030.10 (50s Ribosomal Protein L17; Chain: A,) in Large ribosomal subunit protein bL17. Showing 1 copy in chain O.
3.90.1170.10
Class: Alpha Beta
Architecture: Alpha-Beta Complex
Topology: Aldehyde Oxidoreductase; domain 3
Homology: Ribosomal protein L10e/L16
Occurring in:
  1. Large ribosomal subunit protein uL16
The deposited structure of PDB entry 5gae contains 1 copy of CATH domain 3.90.1170.10 (Aldehyde Oxidoreductase; domain 3) in Large ribosomal subunit protein uL16. Showing 1 copy in chain N.
2.40.150.20
Class: Mainly Beta
Architecture: Beta Barrel
Topology: Ribosomal Protein L14
Homology: Ribosomal protein L14
Occurring in:
  1. Large ribosomal subunit protein uL14
The deposited structure of PDB entry 5gae contains 1 copy of CATH domain 2.40.150.20 (Ribosomal Protein L14) in Large ribosomal subunit protein uL14. Showing 1 copy in chain L.
1.10.10.250
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Arc Repressor Mutant, subunit A
Homology: Ribosomal protein L11, C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL11
The deposited structure of PDB entry 5gae contains 1 copy of CATH domain 1.10.10.250 (Arc Repressor Mutant, subunit A) in Large ribosomal subunit protein uL11. Showing 1 copy in chain J.
3.30.70.1730
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Alpha-Beta Plaits
Homology: Alpha-Beta Plaits
Occurring in:
  1. Large ribosomal subunit protein uL10
The deposited structure of PDB entry 5gae contains 1 copy of CATH domain 3.30.70.1730 (Alpha-Beta Plaits) in Large ribosomal subunit protein uL10. Showing 1 copy in chain I.
3.30.1440.10
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: 50s Ribosomal Protein L5; Chain: A,
Homology: 50s Ribosomal Protein L5; Chain: A,
Occurring in:
  1. Large ribosomal subunit protein uL5
The deposited structure of PDB entry 5gae contains 1 copy of CATH domain 3.30.1440.10 (50s Ribosomal Protein L5; Chain: A,) in Large ribosomal subunit protein uL5. Showing 1 copy in chain F.
4.10.950.10
Class: Few Secondary Structures
Architecture: Irregular
Topology: Ribosomal protein L2; domain 3
Homology: Ribosomal protein L2, domain 3
Occurring in:
  1. Large ribosomal subunit protein uL2
The deposited structure of PDB entry 5gae contains 1 copy of CATH domain 4.10.950.10 (Ribosomal protein L2; domain 3) in Large ribosomal subunit protein uL2. Showing 1 copy in chain C.
2.40.50.140
Class: Mainly Beta
Architecture: Beta Barrel
Topology: OB fold (Dihydrolipoamide Acetyltransferase, E2P)
Homology: Nucleic acid-binding proteins
Occurring in:
  1. Large ribosomal subunit protein uL2
The deposited structure of PDB entry 5gae contains 1 copy of CATH domain 2.40.50.140 (OB fold (Dihydrolipoamide Acetyltransferase, E2P)) in Large ribosomal subunit protein uL2. Showing 1 copy in chain C.

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