3 bound ligands:
DMS 201(A)
Environment details ›
Jmol._Canvas2D (Jmol) "_PDBE_JMOL"[x]
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Jmol JavaScript applet _PDBE_JMOL__29059708043988053__ initializing
Jmol getValue debug null
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Jmol getValue allowjavascript true
AppletRegistry.checkIn(_PDBE_JMOL__29059708043988053__)
vwrOptions:
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setting document base to "https://www.ebi.ac.uk/pdbe/entry/pdb/5hz5/ligands"
(C) 2012 Jmol Development
Jmol Version: 14.3.6_2014.08.17b 2014-08-17 17:24
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s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/core/corescript.z.js
script 1 started
FileManager.getAtomSetCollectionFromFile(https://www.ebi.ac.uk/pdbe/entry-files/download/5hz5.cif)
FileManager opening 1 https://www.ebi.ac.uk/pdbe/entry-files/download/5hz5.cif
The Resolver thinks MMCif
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s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/JU/CifDataParser.js
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s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/J/shape/Mesh.js
TITLE: Design and synthesis of selective, dual fatty acid binding protein 4 and 5 inhibitors.
Setting space group name to HM:P 43 21 2
found biomolecule 1: A,B,C,D,E
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/core/coresym.z.js
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-- required by JU.Eigen
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/JU/EigenSort.js
Time for openFile(*5hz5): 1472 ms
reading 1280 atoms
ModelSet: haveSymmetry:false haveUnitcells:true haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
model 1.1 alternative locations: AB
Default Van der Waals type for model set to Jmol
1280 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
TITLE: Design and synthesis of selective, dual fatty acid binding protein 4 and 5 inhibitors.
found biomolecule 1: A,B,C,D,E
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/core/corescriptmath.z.js
Script completed
Jmol script terminated
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script 2 started
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-- required by J.shapesurface.Contact
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-- required by J.shapesurface.Isosurface
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contact ID "hb" {environmentAtoms} hbond color TRANSLUCENT 0.2 purple;
Contact pairs: 41
s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/J/jvxl/readers/IsoIntersectReader.js
Contacts: 8 with net volume 6.4273730711513375 A^3
RasMol pseudo-hbond calculation
0 hydrogen bonds
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Jmol script terminated
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-- required by javajs.img.Huffman
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-- required by javajs.img.ImageEncoder
script 3 started
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contact ID "hb" {environmentAtoms} hbond color TRANSLUCENT 0.2 purple;
Contact pairs: 13
Contacts: 8 with net volume 6.549589210713755 A^3
RasMol pseudo-hbond calculation
0 hydrogen bonds
Script completed
Jmol script terminated
script 4 started
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forceAutoBond = true
contact ID "hb" {environmentAtoms} hbond color TRANSLUCENT 0.2 purple;
Contact pairs: 9
Contacts: 1 with net volume 1.0058986304199633 A^3
RasMol pseudo-hbond calculation
0 hydrogen bonds
Script completed
Jmol script terminated
script 5 started
Script completed
Jmol script terminated
script 6 started
Script completed
Jmol script terminated
SO4 202(A)
Environment details ›
65X 203(A)
Environment details ›