› 5idw

X-ray diffraction
2Å resolution

Crystal structure of an oxidoreductase from Burkholderia vietnamiensis in complex with NADP

Released:
DOI: 10.2210/pdb5idw/pdb
PDB entry 5idw coloured by chain, front view.
PDB entry 5idw coloured by chain, side view.
PDB entry 5idw coloured by chain, top view.
Source organism: Burkholderia vietnamiensis G4
Entry author: Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107363 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Short-chain dehydrogenase/reductase SDR Chains: A, B
Molecule details ›
Chains: A, B
Length: 233 amino acids
Theoretical weight: 25.04 KDa
Source organism: Burkholderia vietnamiensis G4
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A4JIB1 (Residues: 1-225; Coverage: 100%)
Gene name: Bcep1808_3023
Sequence domains: short chain dehydrogenase
Structure domains: NAD(P)-binding Rossmann-like Domain

Ligands and Environments

1 bound ligand:
Ligand NAP 2 x NAP
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU FR-E SUPERBRIGHT
Spacegroup: P21
Unit cell:
a: 61.81Å b: 49.23Å c: 66.96Å
α: 90° β: 94.99° γ: 90°
R-values:
R R work R free
0.185 0.181 0.237
Expression system: Escherichia coli BL21(DE3)

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