5j5v

X-ray diffraction
2.75Å resolution

CdiA-CT from uropathogenic Escherichia coli in complex with cognate immunity protein and CysK

Released:

Function and Biology Details

Structure analysis Details

Assemblies composition:
hetero trimer (preferred)
hetero hexamer
PDBe Complex ID:
PDB-CPX-199468 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Cysteine synthase Chains: A, D
Molecule details ›
Chains: A, D
Length: 323 amino acids
Theoretical weight: 34.73 KDa
Source organism: Escherichia coli O157:H7
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A0A454A691 (Residues: 1-323; Coverage: 100%)
Gene name: ECP_2438
Sequence domains: Pyridoxal-phosphate dependent enzyme
Structure domains: Rossmann fold
tRNA nuclease CdiA Chains: B, E
Molecule details ›
Chains: B, E
Length: 228 amino acids
Theoretical weight: 24.84 KDa
Source organism: Escherichia coli 536
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q0T963 (Residues: 3015-3242; Coverage: 7%)
Gene names: ECP_4580, cdiA
Immunity protein CdiI Chains: C, F
Molecule details ›
Chains: C, F
Length: 138 amino acids
Theoretical weight: 16.23 KDa
Source organism: Escherichia coli 536
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q0T964 (Residues: 1-128; Coverage: 100%)
Gene names: ECP_4579, cdiI
Sequence domains: CDI immunity proteins

Ligands and Environments

No bound ligands
2 modified residues:

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL7-1
Spacegroup: C2221
Unit cell:
a: 81.251Å b: 195.539Å c: 175.061Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.198 0.196 0.248
Expression system: Escherichia coli BL21(DE3)