Function and Biology

VipA-N2/VipB contracted sheath of type VI secretion system

Source organism: Vibrio cholerae
Biochemical function: not assigned
Biological process: not assigned
Cellular component: not assigned

GO terms

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Sequence families

Pfam Protein families (Pfam)
PF05591
Domain description: Type VI secretion system, VipA, VC_A0107 or Hcp2
Occurring in:
  1. Type VI secretion system contractile sheath small subunit
The deposited structure of PDB entry 5myu contains 6 copies of Pfam domain PF05591 (Type VI secretion system, VipA, VC_A0107 or Hcp2) in Type VI secretion system contractile sheath small subunit. Showing 1 copy in chain A [auth a].

PF18945
Domain description: EvpB/VC_A0108, tail sheath gpW/gp25-like domain
Occurring in:
  1. Type VI secretion system contractile sheath large subunit
The deposited structure of PDB entry 5myu contains 6 copies of Pfam domain PF18945 (EvpB/VC_A0108, tail sheath gpW/gp25-like domain) in Type VI secretion system contractile sheath large subunit. Showing 1 copy in chain B [auth A].

PF05943
Domain description: EvpB/VC_A0108, tail sheath N-terminal domain
Occurring in:
  1. Type VI secretion system contractile sheath large subunit
The deposited structure of PDB entry 5myu contains 6 copies of Pfam domain PF05943 (EvpB/VC_A0108, tail sheath N-terminal domain) in Type VI secretion system contractile sheath large subunit. Showing 1 copy in chain B [auth A].

InterPro InterPro annotations
IPR008312
Domain description: Type VI secretion system sheath protein TssB1
Occurring in:
  1. Type VI secretion system contractile sheath small subunit
IPR010269
Domain description: Type VI secretion system TssC-like
Occurring in:
  1. Type VI secretion system contractile sheath large subunit
IPR044032
Domain description: TssC1, C-terminal
Occurring in:
  1. Type VI secretion system contractile sheath large subunit
IPR044031
Domain description: TssC1, N-terminal
Occurring in:
  1. Type VI secretion system contractile sheath large subunit