› 5oac

Electron Microscopy
4Å resolution

FLiP major capsid protein

Released:
DOI: 10.2210/pdb5oac/pdb
PDB entry 5oac coloured by chain, front view.
PDB entry 5oac coloured by chain, side view.
PDB entry 5oac coloured by chain, top view.
Source organism: Bacteriophage sp.
Primary publication:
Virus found in a boreal lake links ssDNA and dsDNA viruses.
Laanto E, Mäntynen S, De Colibus L, Marjakangas J, Gillum A, Stuart DI, Ravantti JJ, Huiskonen JT, Sundberg LR
Proc Natl Acad Sci U S A 114 8378-8383 (2017)
PMID: 28716906
Related structures: EMD-3771

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo 600-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-104159 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Major capsid protein Chains: A, B, C, D, E, F, G, H, I, J
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J
Length: 310 amino acids
Theoretical weight: 34.53 KDa
Source organism: Bacteriophage sp.
UniProt:
  • Canonical: A0A2D0TC94 (Residues: 1-310; Coverage: 100%)

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4Å
Relevant EMDB volumes: EMD-3771

Quick links

Citations

9 review citations

Global Organization and Proposed Megataxonomy of the Virus World.
Koonin et al. (2020)
8 more

9 mentions without citation

Superimposition of Viral Protein Structures: A Means to Decipher the Phylogenies of Viruses.
Ravantti et al. (2020)
8 more