EC 2.7.7.6: DNA-directed RNA polymerase
Reaction catalysed:
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)
Systematic name:
Nucleoside-triphosphate:RNA nucleotidyltransferase (DNA-directed)
Alternative Name(s):
- C RNA formation factors
- C ribonucleic acid formation factors
- DNA-dependent RNA nucleotidyltransferase
- DNA-dependent RNA polymerase
- DNA-dependent ribonucleate nucleotidyltransferase
- Deoxyribonucleic acid-dependent ribonucleic acid polymerase
- RNA nucleotidyltransferase
- RNA nucleotidyltransferase (DNA-directed)
- RNA polymerase
- RNA polymerase I
- RNA polymerase II
- RNA polymerase III
- RNA transcriptase
- Ribonucleate nucleotidyltransferase
- Ribonucleate polymerase
- Ribonucleic acid nucleotidyltransferase
- Ribonucleic acid polymerase
- Ribonucleic acid transcriptase
- Ribonucleic polymerase
- Ribonucleic transcriptase
- Transcriptase
EC 3.6.4.12: DNA helicase
Reaction catalysed:
ATP + H(2)O = ADP + phosphate
Systematic name:
ATP phosphohydrolase (DNA helix unwinding)
Alternative Name(s):
- 3' to 5' DNA helicase
- 3'-5' DNA helicase
- 3'-5' PfDH
- 5' to 3' DNA helicase
- AvDH1
- BACH1 helicase
- BLM protein
- BRCA1-associated C-terminal helicase
- BcMCM
- CeWRN-1
- DNA helicase 120
- DNA helicase A
- DNA helicase E
- DNA helicase II
- DNA helicase III
- DNA helicase RECQL5'
- DNA helicase VI
- Dbp9p
- DmRECQ5
- DnaB
- DnaB helicase E1
- HHcsA
- HPif1
- Hel E
- Helicase DnaB
- Helicase HDH IV
- Helicase domain of bacteriophage T7 gene 4 protein helicase
- Hmi1p
- MCM helicase
- MCM protein
- MER3 helicase
- MER3 protein
- MPH1
- PDH120
- PIF1
- PcrA
- PcrA helicase
- PfDH A
- Pfh1p
- UvrD
GO terms
Biochemical function:
Biological process:
Cellular component:
Sequence families
Protein families (Pfam)
PF07544
Domain description:
RNA polymerase II transcription mediator complex subunit 9
Occurring in:
Occurring in:
PF08612
Domain description:
TATA-binding related factor (TRF) of subunit 20 of Mediator complex
Occurring in:
Occurring in:
PF10232
Domain description:
Mediator of RNA polymerase II transcription complex subunit 8
Occurring in:
Occurring in:
PF02268
Domain description:
Transcription initiation factor IIA, gamma subunit, helical domain
Occurring in:
Occurring in:
PF05793
Domain description:
Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
Occurring in:
Occurring in:
InterPro annotations
IPR003166
Domain description:
Transcription factor TFIIE beta subunit, DNA-binding domain
Occurring in:
Occurring in:
IPR005570
Domain description:
DNA-directed RNA polymerases I, II, and III subunit RPABC3
Occurring in:
Occurring in:
IPR015871
Domain description:
Transcription initiation factor IIA, gamma subunit, C-terminal
Occurring in:
Occurring in:
IPR015872
Domain description:
Transcription initiation factor IIA, gamma subunit, N-terminal
Occurring in:
Occurring in:
IPR006591
Domain description:
RNA polymerase archaeal subunit P/eukaryotic subunit RPABC4
Occurring in:
Occurring in:
IPR012164
Domain description:
DNA-directed RNA polymerase subunit/transcription factor S
Occurring in:
Occurring in:
IPR038089
Domain description:
Mediator of RNA polymerase II, subunit Med31 superfamily
Occurring in:
Occurring in:
IPR016530
Domain description:
Mediator of RNA polymerase II transcription subunit 22, Saccharomycetes
Occurring in:
Occurring in:
IPR002853
Domain description:
Transcription initiation factor IIE subunit alpha, N-terminal
Occurring in:
Occurring in:
IPR029040
Domain description:
RNA polymerase subunit RPABC4/transcription elongation factor Spt4
Occurring in:
Occurring in:
IPR039747
Domain description:
DNA-directed RNA polymerases I, II, and III subunit RPABC4
Occurring in:
Occurring in:
IPR008193
Domain description:
DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site
Occurring in:
Occurring in:
IPR009025
Domain description:
DNA-directed RNA polymerase, RBP11-like dimerisation domain
Occurring in:
Occurring in:
IPR019761
Domain description:
DNA-directed RNA polymerase M, 15kDa subunit, conserved site
Occurring in:
Occurring in:
IPR020708
Domain description:
DNA-directed RNA polymerase, 14-18kDa subunit, conserved site
Occurring in:
Occurring in:
IPR001514
Domain description:
DNA-directed RNA polymerase, 30-40kDa subunit, conserved site
Occurring in:
Occurring in:
IPR037033
Domain description:
DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily
Occurring in:
Occurring in:
IPR007120
Domain description:
DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
Occurring in:
Occurring in:
IPR002464
Domain description:
DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
Occurring in:
Occurring in:
IPR014013
Domain description:
Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type
Occurring in:
Occurring in: