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PanDDA analysis group deposition -- Crystal Structure of SP100 after initial refinement with no ligand modelled (structure 93)

Source organism: Homo sapiens
Biochemical function: not assigned
Biological process: not assigned
Cellular component: not assigned

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GO terms

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Sequence family

InterPro InterPro annotations
IPR001487
Domain description: Bromodomain
Occurring in:
  1. Nuclear autoantigen Sp-100
IPR036427
Domain description: Bromodomain-like superfamily
Occurring in:
  1. Nuclear autoantigen Sp-100
IPR030411
Domain description: Nuclear body protein Sp140, bromodomain
Occurring in:
  1. Nuclear autoantigen Sp-100
IPR019786
Domain description: Zinc finger, PHD-type, conserved site
Occurring in:
  1. Nuclear autoantigen Sp-100
IPR001965
Domain description: Zinc finger, PHD-type
Occurring in:
  1. Nuclear autoantigen Sp-100
IPR019787
Domain description: Zinc finger, PHD-finger
Occurring in:
  1. Nuclear autoantigen Sp-100
IPR011011
Domain description: Zinc finger, FYVE/PHD-type
Occurring in:
  1. Nuclear autoantigen Sp-100
IPR043563
Domain description: Nuclear body protein Sp110/Sp140/Sp140L-like
Occurring in:
  1. Nuclear autoantigen Sp-100
IPR013083
Domain description: Zinc finger, RING/FYVE/PHD-type
Occurring in:
  1. Nuclear autoantigen Sp-100

Structure domains

CATH CATH domains
1.20.920.10
Class: Mainly Alpha
Architecture: Up-down Bundle
Topology: Histone Acetyltransferase; Chain A
Homology: Bromodomain-like
Occurring in:
  1. Nuclear autoantigen Sp-100
The deposited structure of PDB entry 5pyx contains 2 copies of CATH domain 1.20.920.10 (Histone Acetyltransferase; Chain A) in Nuclear autoantigen Sp-100. Showing 1 copy in chain A.
3.30.40.10
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Herpes Virus-1
Homology: Zinc/RING finger domain, C3HC4 (zinc finger)
Occurring in:
  1. Nuclear autoantigen Sp-100
The deposited structure of PDB entry 5pyx contains 2 copies of CATH domain 3.30.40.10 (Herpes Virus-1) in Nuclear autoantigen Sp-100. Showing 1 copy in chain A.

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