› 5uil

X-ray diffraction
2.2Å resolution

X-ray structure of the FdtF N-formyltransferase from Salmonella enterica O60 in complex with TDP-Fuc3N and tetrahydrofolate

Released:
DOI: 10.2210/pdb5uil/pdb
PDB entry 5uil coloured by chain, front view.
PDB entry 5uil coloured by chain, side view.
PDB entry 5uil coloured by chain, top view.
Source organism: Salmonella enterica
Primary publication:
Molecular architecture of an N-formyltransferase from Salmonella enterica O60.
Woodford CR, Thoden JB, Holden HM
J Struct Biol 200 267-278 (2017)
PMID: 28263875

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-197529 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Formyl transferase N-terminal domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 405 amino acids
Theoretical weight: 46.42 KDa
Source organism: Salmonella enterica
Expression system: Escherichia coli
UniProt:
  • Canonical: U3GK13 (Residues: 1-398; Coverage: 100%)
Gene name: fdtF
Sequence domains:

Ligands and Environments

3 bound ligands:
Ligand 1YJ 2 x 1YJ
Ligand T3F 4 x T3F
Ligand NA 4 x NA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RU200
Spacegroup: P212121
Unit cell:
a: 68.671Å b: 72.812Å c: 191.738Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.206 0.202 0.27
Expression system: Escherichia coli

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Citations

6 citation in other articles

Investigation of a sugar N-formyltransferase from the plant pathogen Pantoea ananatis.
Hofmeister et al. (2019)
5 more

2 mentions without citation

Design and Engineering of Miniproteins.
Ożga et al. (2022)
1 more