5urx

Electron Microscopy
28Å resolution

Structure of the contracted type VI secretion system sheath in Myxococcus xanthus

Released:
Source organism: Myxococcus xanthus DK 1622
Related structures: EMD-8602

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero 36-mer (preferred)
PDBe Complex ID:
PDB-CPX-172791 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Type VI secretion system-associated protein Chains: 1A, 1C, 1E, 1G, 1I, 1K, 2A, 2C, 2E, 2G, 2I, 2K, 3A, 3C, 3E, 3G, 3I, 3K
Molecule details ›
Chains: 1A, 1C, 1E, 1G, 1I, 1K, 2A, 2C, 2E, 2G, 2I, 2K, 3A, 3C, 3E, 3G, 3I, 3K
Length: 164 amino acids
Theoretical weight: 18.02 KDa
Source organism: Myxococcus xanthus DK 1622
UniProt:
  • Canonical: Q1D305 (Residues: 1-164; Coverage: 100%)
Gene name: MXAN_4807
Sequence domains: Type VI secretion system, VipA, VC_A0107 or Hcp2
Type VI secretion protein Chains: 1B, 1D, 1F, 1H, 1J, 1L, 2B, 2D, 2F, 2H, 2J, 2L, 3B, 3D, 3F, 3H, 3J, 3L
Molecule details ›
Chains: 1B, 1D, 1F, 1H, 1J, 1L, 2B, 2D, 2F, 2H, 2J, 2L, 3B, 3D, 3F, 3H, 3J, 3L
Length: 494 amino acids
Theoretical weight: 56.19 KDa
Source organism: Myxococcus xanthus DK 1622
UniProt:
  • Canonical: Q1D304 (Residues: 1-494; Coverage: 100%)
Gene name: MXAN_4808
Sequence domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 28Å
Relevant EMDB volumes: EMD-8602