PDB 5v8l structure summary ‹ Protein Data Bank in Europe (PDBe)

Function and Biology Details

Biochemical function:

structural molecule activity

Biological process:

not assigned

Cellular component:

viral envelope

Sequence domains:

2 more domains

Structure analysis Details

Assembly composition:

hetero tetradecamer (preferred)

Assembly name:

Envelope glycoprotein gp160 and IG-heavy chain and IG-heavy chain and IG-light kappa chain and IG-light kappa chain (preferred)

PDBe Complex ID:

PDB-CPX-212135 (preferred)

Entry contents:

6 distinct polypeptide molecules

Macromolecules (13 distinct):

Envelope glycoprotein gp160 Chains: A, C, D

Molecule details ›

Chains: A, C, D
Length: 481 amino acids
Theoretical weight: 54.06 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Homo sapiens
UniProt:

Canonical: Q2N0S6 (Residues: 30-505; Coverage: 55%)

Gene name: env
Sequence domains: Envelope glycoprotein GP120

Transmembrane protein gp41 Chains: B, E, F

Molecule details ›

Chains: B, E, F
Length: 153 amino acids
Theoretical weight: 17.15 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Homo sapiens
UniProt:

Canonical: Q2N0S6 (Residues: 509-661; Coverage: 18%)

Gene name: env
Sequence domains: Retroviral envelope protein

3BNC117 antibody, heavy chain Chains: G, H, I

Molecule details ›

Chains: G, H, I
Length: 226 amino acids
Theoretical weight: 24.66 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

PGT145 antibody, heavy chain Chain: J

Molecule details ›

Chain: J
Length: 267 amino acids
Theoretical weight: 28.79 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

3BNC117 antibody, light chain Chains: K, L, M

Molecule details ›

Chains: K, L, M
Length: 206 amino acids
Theoretical weight: 23.02 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

PGT145 antibody, light chain Chain: N

Molecule details ›

Chain: N
Length: 219 amino acids
Theoretical weight: 23.95 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens