› 5wk4

X-ray diffraction
1.5Å resolution

Crystal structure of an anti-idiotype VLR

Released:
DOI: 10.2210/pdb5wk4/pdb
PDB entry 5wk4 coloured by chain, front view.
PDB entry 5wk4 coloured by chain, side view.
PDB entry 5wk4 coloured by chain, top view.
Source organism: Petromyzon marinus
Primary publication:
Crystal structure of an anti-idiotype variable lymphocyte receptor.
Collins BC, Nakahara H, Acharya S, Cooper MD, Herrin BR, Wilson IA
Acta Crystallogr F Struct Biol Commun 73 682-687 (2017)
PMID: 29199989

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-166269 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Variable lymphocyte receptor 39 Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 201 amino acids
Theoretical weight: 21.96 KDa
Source organism: Petromyzon marinus
Expression system: Homo sapiens

Ligands and Environments

1 bound ligand:
Ligand MG 4 x MG
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL12-2
Spacegroup: P1
Unit cell:
a: 60.415Å b: 61.382Å c: 80.562Å
α: 110.09° β: 99.79° γ: 93.52°
R-values:
R R work R free
0.195 0.193 0.223
Expression system: Homo sapiens

Quick links

Citations

2 citation in other articles

Molecular Characterization of a B Cell Adaptor for Phosphoinositide 3-Kinase Homolog in Lamprey (Lampetra japonica) and Its Function in the Immune Response.
Chai et al. (2022)
1 more

1 mention without citation

Crystal structure of an anti-idiotype variable lymphocyte receptor.
Collins et al. (2017)