› 5y05

X-ray diffraction
2.8Å resolution

Structural characterization of msmeg_4306 from Mycobacterium smegmatis

Released:
DOI: 10.2210/pdb5y05/pdb
PDB entry 5y05 coloured by chain, front view.
PDB entry 5y05 coloured by chain, side view.
PDB entry 5y05 coloured by chain, top view.
Source organism: Mycolicibacterium smegmatis MC2 155
Primary publication:
Crystal structure of the MSMEG_4306 gene product from Mycobacterium smegmatis.
Kumar A, Karthikeyan S
OpenAccess logo Acta Crystallogr F Struct Biol Commun 74 166-173 (2018)
PMID: 29497021

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-106398 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
C4-type zinc ribbon domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 262 amino acids
Theoretical weight: 29.54 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A0R095 (Residues: 1-242; Coverage: 100%)
Gene name: MSMEG_4306
Sequence domains: C4-type zinc ribbon domain

Ligands and Environments

1 bound ligand:
Ligand ZN 1 x ZN
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE BM14
Spacegroup: P3121
Unit cell:
a: 77.137Å b: 77.137Å c: 85.791Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.26 0.258 0.312
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

2 mentions without citation

Comparative Genomic Analysis of the DUF34 Protein Family Suggests Role as a Metal Ion Chaperone or Insertase.
Reed et al. (2021)
1 more