6c01

X-ray diffraction
2.3Å resolution

Human ectonucleotide pyrophosphatase / phosphodiesterase 3 (ENPP3, NPP3, CD203c)

Released:
Source organism: Homo sapiens

Function and Biology Details

Structure analysis Details

Assembly composition:
monomeric (preferred)
PDBe Complex ID:
PDB-CPX-518061 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (8 distinct):
Ectonucleotide pyrophosphatase/phosphodiesterase family member 3 Chains: A, B
Molecule details ›
Chains: A, B
Length: 838 amino acids
Theoretical weight: 96.51 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: O14638 (Residues: 48-875; Coverage: 95%)
Gene names: ENPP3, PDNP3
Sequence domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: NAG, BMA
Carbohydrate polymer : NEW Components: NAG, FUC
Carbohydrate polymer : NEW Components: NAG, BMA, FUC, MAN
Carbohydrate polymer : NEW Components: NAG, BMA, MAN
Carbohydrate polymer : NEW Components: NAG, BMA, MAN
Carbohydrate polymer : NEW Components: NAG, BMA, MAN
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: CLSI BEAMLINE 08ID-1
Spacegroup: P212121
Unit cell:
a: 96.184Å b: 133.64Å c: 167.43Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.175 0.174 0.214
Expression system: Spodoptera frugiperda