› 6mj9

X-ray diffraction
1.85Å resolution

CRYSTAL STRUCTURE OF UBIQUITIN-CONJUGATING ENZYME FROM NAEGLERIA FOWLERI, APO FORM

Released:
DOI: 10.2210/pdb6mj9/pdb
Model geometry
Data not analysed
Fit model/data
Data not analysed
PDB entry 6mj9 coloured by chain, front view.
PDB entry 6mj9 coloured by chain, side view.
PDB entry 6mj9 coloured by chain, top view.
Source organism: Naegleria fowleri
Entry author: Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-103832 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
UBC core domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 169 amino acids
Theoretical weight: 19.34 KDa
Source organism: Naegleria fowleri
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A0A1W2VMZ9 (Residues: 1-161; Coverage: 100%)
Sequence domains: Ubiquitin-conjugating enzyme

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU FR-E+ SUPERBRIGHT
Spacegroup: P212121
Unit cell:
a: 37.3Å b: 42.87Å c: 89.96Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.187 0.183 0.222
Expression system: Escherichia coli BL21(DE3)

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Experimental raw data

Links to raw experimental data available for this entry are listed below

Diffraction data related to PDB entry 6mj9 found at the Integrated Resource for Reproducibility in Macromolecular Crystallography (IRRMC)

Data DOI: 10.18430/m36mj9
Datasets: 4
Total size: 1.28Gb
Protein diffraction thumbnail