› 6odh

X-ray diffraction
2.3Å resolution

BH3 domain swapped dimer of a BAK fragment

Released:
DOI: 10.2210/pdb6odh/pdb
PDB entry 6odh coloured by chain, front view.
PDB entry 6odh coloured by chain, side view.
PDB entry 6odh coloured by chain, top view.
Source organism: Homo sapiens
Entry author: Liu L-K

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-556947 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Bcl-2 homologous antagonist/killer Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 84 amino acids
Theoretical weight: 9.72 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q16611 (Residues: 71-147; Coverage: 37%)
  • Best match: Q16611-2 (Residues: 71-116)
Gene names: BAK, BAK1, BCL2L7, CDN1
Sequence domains: Apoptosis regulator proteins, Bcl-2 family

Ligands and Environments

3 bound ligands:
Ligand SO4 2 x SO4
Ligand EPE 5 x EPE
Ligand PEG 2 x PEG
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 17-ID
Spacegroup: P1
Unit cell:
a: 45.043Å b: 55.039Å c: 55.682Å
α: 117.13° β: 107.97° γ: 97.55°
R-values:
R R work R free
0.217 0.214 0.271
Expression system: Escherichia coli

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