6wdq

X-ray diffraction
3.4Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
PDBe Complex ID:
PDB-CPX-279895 (preferred)
Entry contents:
4 distinct polypeptide molecules
Macromolecules (6 distinct):
Interleukin-12 subunit beta Chain: A
Molecule details ›
Chain: A
Length: 308 amino acids
Theoretical weight: 34.91 KDa
Source organism: Homo sapiens
Expression system: Trichoplusia ni
UniProt:
  • Canonical: P29460 (Residues: 21-328; Coverage: 100%)
Gene names: IL12B, NKSF2
Sequence domains: Cytokine interleukin-12p40 C-terminus
Interleukin-23 subunit alpha Chain: B
Molecule details ›
Chain: B
Length: 171 amino acids
Theoretical weight: 19.1 KDa
Source organism: Homo sapiens
Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q9NPF7 (Residues: 28-189; Coverage: 95%)
Gene names: IL23A, SGRF, UNQ2498/PRO5798
Sequence domains: Interleukin 23 subunit alpha
Interleukin-23 receptor Chain: C
Molecule details ›
Chain: C
Length: 307 amino acids
Theoretical weight: 35.67 KDa
Source organism: Homo sapiens
Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q5VWK5 (Residues: 24-317; Coverage: 49%)
  • Best match: Q5VWK5-4 (Residues: 24-164)
Gene name: IL23R
Interleukin-12 receptor subunit beta-1 Chain: D
Molecule details ›
Chain: D
Length: 219 amino acids
Theoretical weight: 24.7 KDa
Source organism: Homo sapiens
Expression system: Trichoplusia ni
UniProt:
  • Canonical: P42701 (Residues: 27-239; Coverage: 33%)
Gene names: IL12R, IL12RB, IL12RB1

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA
Carbohydrate polymer : NEW Components: NAG
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL12-2
Unit cell:
a: 75.712Å b: 118.483Å c: 186.151Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.243 0.238 0.295
Expression system: Trichoplusia ni