6xw4

X-ray diffraction
2.19Å resolution

Crystal structure of murine norovirus P domain in complex with Nanobody NB-5867

Released:
Model geometry
Fit model/data

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
PDBe Complex ID:
PDB-CPX-280261 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Capsid protein VP1 Chains: A, B
Molecule details ›
Chains: A, B
Length: 306 amino acids
Theoretical weight: 33.32 KDa
Source organism: Murine norovirus 1
Expression system: Escherichia coli BL21
Nanobody NB-5867 Chains: C, D
Molecule details ›
Chains: C, D
Length: 128 amino acids
Theoretical weight: 14.2 KDa
Source organism: Vicugna pacos
Expression system: Escherichia coli

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: ESRF BEAMLINE ID30B
Spacegroup: P212121
Unit cell:
a: 75.33Å b: 109.04Å c: 146.66Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.176 0.173 0.218
Expression systems:
  • Escherichia coli BL21
  • Escherichia coli