6zqw

Electron Microscopy
7.8Å resolution

Cryo-EM structure of immature Spondweni virus

Released:

Function and Biology Details

Reactions catalysed:
Selective hydrolysis of -Xaa-Xaa-|-Yaa- bonds in which each of the Xaa can be either Arg or Lys and Yaa can be either Ser or Ala.
NTP + H(2)O = NDP + phosphate
ATP + H(2)O = ADP + phosphate
Biochemical function:
Biological process:
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero 540-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-504569 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Genome polyprotein Chains: A, D, G
Molecule details ›
Chains: A, D, G
Length: 505 amino acids
Theoretical weight: 54.84 KDa
Source organism: Spondweni virus
UniProt:
  • Canonical: C8XPB6 (Residues: 290-794; Coverage: 15%)
Sequence domains:
prM Chains: B, C, E, F, H, I
Molecule details ›
Chains: B, C, E, F, H, I
Length: 169 amino acids
Theoretical weight: 19.07 KDa
Source organism: Spondweni virus
UniProt:
  • Canonical: C8XPB6 (Residues: 121-289; Coverage: 5%)
Sequence domains:

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 7.8Å
Relevant EMDB volumes: EMD-11372