6a8b

X-ray diffraction
2.01Å resolution

Ribokinase from Leishmania donovani with AMPPCP

Released:

Function and Biology Details

Reaction catalysed:
ATP + D-ribose = ADP + D-ribose 5-phosphate
Biochemical function:
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-104979 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Ribokinase Chains: A, B
Molecule details ›
Chains: A, B
Length: 349 amino acids
Theoretical weight: 37.58 KDa
Source organism: Leishmania donovani BPK282A1
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A0A3S7X0F5 (Residues: 1-329; Coverage: 100%)
Gene names: CGC21_31255, LDBPK_270430, LdCL_270009100
Sequence domains: pfkB family carbohydrate kinase

Ligands and Environments

No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: RIGAKU MICROMAX-007
Spacegroup: P61
Unit cell:
a: 100.395Å b: 100.395Å c: 125.785Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.186 0.184 0.226
Expression system: Escherichia coli BL21(DE3)