› 6awt

X-ray diffraction
2.3Å resolution

Structure of PR 10 Allergen in complex with epicatechin

Released:
DOI: 10.2210/pdb6awt/pdb
PDB entry 6awt coloured by chain, front view.
PDB entry 6awt coloured by chain, side view.
PDB entry 6awt coloured by chain, top view.
Source organism: Arachis hypogaea
Entry authors: Offermann LR, Perdue M, McBride J, Hurlburt BK, Maleki SJ, Pote SS, Chruszcz M

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-564649 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Bet v I/Major latex protein domain-containing protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 156 amino acids
Theoretical weight: 16.84 KDa
Source organism: Arachis hypogaea
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q6VT83 (Residues: 2-157; Coverage: 99%)
Sequence domains: Pathogenesis-related protein Bet v 1 family
Structure domains: Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4

Ligands and Environments

3 bound ligands:
Ligand 28E 6 x 28E
Ligand NA 3 x NA
Ligand BEZ 1 x BEZ
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-BM
Spacegroup: P212121
Unit cell:
a: 55.451Å b: 62.507Å c: 186.585Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.217 0.215 0.252
Expression system: Escherichia coli BL21(DE3)

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