› 6bdg

X-ray diffraction
1.96Å resolution

HFQ monomer in spacegroup p6 at 1.93 angstrom resolution

Released:
DOI: 10.2210/pdb6bdg/pdb
Model geometry
Fit model/data
PDB entry 6bdg coloured by chain, front view.
PDB entry 6bdg coloured by chain, side view.
PDB entry 6bdg coloured by chain, top view.
Source organism: Escherichia coli S88
Entry authors: Brown C, Zhang K, Seo C, Ellis MJ, Hanniford DB, Junop M

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo hexamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-141440 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
RNA-binding protein Hfq Chain: A
Molecule details ›
Chain: A
Length: 64 amino acids
Theoretical weight: 7.3 KDa
Source organism: Escherichia coli S88
Expression system: Escherichia coli
UniProt:
  • Canonical: P0A6X3 (Residues: 7-70; Coverage: 63%)
Gene names: JW4130, b4172, hfq
Sequence domains: Hfq protein
Structure domains: SH3 type barrels.

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: RIGAKU MICROMAX-003
Spacegroup: P6
Unit cell:
a: 61.37Å b: 61.37Å c: 28.26Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.196 0.192 0.233
Expression system: Escherichia coli

Quick links

PDB-REDO

The sliders below show the change in model quality between original PDB entry and the PDB-REDO entry

Model Geometry
 
 
Data not available
DNA/RNA Geometry
 
 
Data not available
Fit model/data
 
 
Data not available
PDB-REDO