› › F57

(2R)-1-(decanoyloxy)-3-(phosphonooxy)propan-2-yl octadecanoate

F57 model coordinates provided in the wwPDB chemical component dictionary
(2R)-1-(decanoyloxy)-3-(phosphonooxy)propan-2-yl octadecanoate in PDB entry 6bmk, assembly 1, side view.
(2R)-1-(decanoyloxy)-3-(phosphonooxy)propan-2-yl octadecanoate in PDB entry 6bmk, assembly 1, top view.
Formula: C31 H61 O8 P
Molecular weight: 593 Da

Environment details NEW

F57 504 bound to chain A
Ligands and residuesInteractions
 hydrophobic
negatively charged
aromatic
polar
cystein
water
positively charged
other
glycine
bound molecule
glycans (SNFG)
aromatic
clashes
covalent
electrostatic
metal hydrophobic
vdw
CYS12GLN14MET69PHE70TYR73SER76PHE77ARG79ASP80ILE81LEU84VAL85PRO90LEU100THR102PHE116VAL118PHE120VAL126TRP133TRP142LEU143PRO146LEU150THR156THR159LEU163

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The above 2D and 3D (Mol*) views of ligand interactions use quaternary structure derived from the PDB entry.
Please note:
  • Some chain IDs in the tooltip are followed by a number in square brackets. This number corresponds to the operation ID (mmCIF ‘oper_expression’) used to transform the chain.
  • The structure seen in Mol* (3D view) was protonated using ChimeraX.
  • Interactions were calculated using Arpeggio (see details for interaction types).
  • The colour scheme used is consistent with Clustal X.

Quick links

EBI resources (F57)

External mappings