› 6eba

X-ray diffraction
3.81Å resolution

Crystal Structure of A Bacterial Homolog to Human Lysosomal Transporter, Spinster, in Inward-facing And Unoccupied Conformation

Released:
DOI: 10.2210/pdb6eba/pdb
PDB entry 6eba coloured by chain, front view.
PDB entry 6eba coloured by chain, side view.
PDB entry 6eba coloured by chain, top view.
Source organism: Hyphomonas neptunium ATCC 15444
Primary publication:
Crystal structure of a bacterial homolog to human lysosomal transporter, spinster
Zhou F, Yao D, Rao B, Zhang L, Nie W, Zou Y, Zhao J,, Cao Y
Sci Bull (Beijing) 64 1310-1317 (2019)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-170870 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Major facilitator superfamily (MFS) profile domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 508 amino acids
Theoretical weight: 54.29 KDa
Source organism: Hyphomonas neptunium ATCC 15444
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q0C3L7 (Residues: 1-499; Coverage: 100%)
Gene name: HNE_0949
Sequence domains: Major Facilitator Superfamily

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL18U1
Spacegroup: P212121
Unit cell:
a: 87.628Å b: 98.487Å c: 125.521Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.316 0.315 0.326
Expression system: Escherichia coli BL21(DE3)

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