6egx

Electron Microscopy
4.06Å resolution

Sacbrood virus of honeybee - expansion state I

Released:
Source organism: Sacbrood virus
Related structures: EMD-3866

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero 240-mer (preferred)
PDBe Complex ID:
PDB-CPX-103958 (preferred)
Entry contents:
4 distinct polypeptide molecules
Macromolecules (4 distinct):
structural protein VP1 Chain: A
Molecule details ›
Chain: A
Length: 229 amino acids
Theoretical weight: 26.15 KDa
Source organism: Sacbrood virus
UniProt:
  • Canonical: Q9WCE9 (Residues: 770-998; Coverage: 8%)
Gene name: pol
structural protein VP2 Chain: B
Molecule details ›
Chain: B
Length: 199 amino acids
Theoretical weight: 22.56 KDa
Source organism: Sacbrood virus
UniProt:
  • Canonical: A0A223DN66 (Residues: 193-391; Coverage: 7%)
structural protein VP3 Chain: C
Molecule details ›
Chain: C
Length: 273 amino acids
Theoretical weight: 30.7 KDa
Source organism: Sacbrood virus
UniProt:
  • Canonical: A0A2I6HDZ6 (Residues: 429-701; Coverage: 10%)
Picornavirus capsid domain-containing protein Chain: D
Molecule details ›
Chain: D
Length: 26 amino acids
Theoretical weight: 3.11 KDa
Source organism: Sacbrood virus
UniProt:
  • Canonical: Q9IGK7 (Residues: 304-329; Coverage: 8%)

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.06Å
Relevant EMDB volumes: EMD-3866