› 6h2b

Electron Microscopy
3.28Å resolution

Structure of the Macrobrachium rosenbergii Nodavirus

Released:
DOI: 10.2210/pdb6h2b/pdb
PDB entry 6h2b coloured by chain, front view.
PDB entry 6h2b coloured by chain, side view.
PDB entry 6h2b coloured by chain, top view.
Source organism: Macrobrachium rosenbergii nodavirus
Primary publication:
Structure of the Macrobrachium rosenbergii nodavirus: A new genus within the Nodaviridae?
Ho KL, Gabrielsen M, Beh PL, Kueh CL, Thong QX, Streetley J, Tan WS, Bhella D
OpenAccess logo PLoS Biol 16 e3000038 (2018)
PMID: 30346944
Related structures: EMD-0129

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domain:

Structure analysis Details

Assembly composition:
homo 180-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-197843 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Capsid protein alpha Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 371 amino acids
Theoretical weight: 41.56 KDa
Source organism: Macrobrachium rosenbergii nodavirus
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: X2FE19 (Residues: 1-371; Coverage: 100%)
Gene name: CP

Ligands and Environments

1 bound ligand:
Ligand CA 6 x CA
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.28Å
Relevant EMDB volumes: EMD-0129
Expression system: Spodoptera frugiperda

Quick links

Citations

2 review citations

Betanodavirus and VER Disease: A 30-year Research Review.
Bandín et al. (2020)
1 more

4 mentions without citation

Structure of the Macrobrachium rosenbergii nodavirus: A new genus within the Nodaviridae?
Ho et al. (2018)
3 more