› 6hnl

X-ray diffraction
2.2Å resolution

Selenomethionine derivative of IdmH 96-104 loop truncation variant

Released:
DOI: 10.2210/pdb6hnl/pdb
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PDB entry 6hnl coloured by chain, front view.
PDB entry 6hnl coloured by chain, side view.
PDB entry 6hnl coloured by chain, top view.
Source organism: Streptomyces antibioticus
Primary publication:
Crystal structure of the putative cyclase IdmH from the indanomycin nonribosomal peptide synthase/polyketide synthase.
Drulyte I, Obajdin J, Trinh CH, Kalverda AP, van der Kamp MW, Hemsworth GR, Berry A
OpenAccess logo IUCrJ 6 1120-1133 (2019)
PMID: 31709067

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-111501 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Ester cyclase Chains: A, B
Molecule details ›
Chains: A, B
Length: 139 amino acids
Theoretical weight: 15.47 KDa
Source organism: Streptomyces antibioticus
Expression system: Escherichia coli
UniProt:
  • Canonical: C5HV10 (Residues: 2-145; Coverage: 93%)
Gene name: idmH
Sequence domains: SnoaL-like polyketide cyclase

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 12 x MSE

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: ESRF BEAMLINE MASSIF-1
Spacegroup: F23
Unit cell:
a: 152.59Å b: 152.59Å c: 152.59Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.229 0.227 0.273
Expression system: Escherichia coli

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Citations

2 review citations

Boosting the Full Potential of PyMOL with Structural Biology Plugins.
Rosignoli et al. (2022)
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3 mentions without citation

A particle size threshold governs diffusion and segregation of PAR-3 during cell polarization.
Chang et al. (2022)
2 more

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