EC 2.3.2.27: RING-type E3 ubiquitin transferase
Reaction catalysed:
S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine
Systematic name:
[E2 ubiquitin-conjugating enzyme]-S-ubiquitinyl-L-cysteine:[acceptor protein]-L-lysine ubiquitin transferase (isopeptide bond-forming; RING-type)
Alternative Name(s):
- RING E3 ligase
- Ubiquitin transferase RING E3
EC 3.6.4.13: RNA helicase
Reaction catalysed:
ATP + H(2)O = ADP + phosphate
Systematic name:
ATP phosphohydrolase (RNA helix unwinding)
Alternative Name(s):
- CSFV NS3 helicase
- DBP2
- DDX17
- DDX25
- DDX3
- DDX3X
- DDX3Y
- DDX4
- DDX5
- DEAD-box RNA helicase
- DEAD-box protein DED1
- DEAH-box RNA helicase
- DEAH-box protein 2
- DED1
- DbpA
- Dex(H/D) RNA helicase
- EIF4A helicase
- EhDEAD1
- EhDEAD1 RNA helicase
- GRTH/DDX25
- KOKV helicase
- Mtr4p
- NPH-II
- Nonstructural protein 3 helicase
- RHA
- RNA helicase A
- RNA helicase DDX3
- RNA helicase Hera
- RNA-dependent ATPase
- TGBp1 NTPase/helicase domain
- VRH1
EC 5.2.1.8: Peptidylprolyl isomerase
Reaction catalysed:
Peptidylproline (omega=180) = peptidylproline (omega=0)
Systematic name:
Peptidylproline cis-trans-isomerase
Alternative Name(s):
- Cyclophilin
- PPIase
- Peptide bond isomerase
- Peptidyl-prolyl cis-trans isomerase
- Peptidylprolyl cis-trans isomerase
- Rotamase
GO terms
Biochemical function:
Biological process:
Cellular component:
Sequence families
Protein families (Pfam)
PF16004
Domain description:
116 kDa U5 small nuclear ribonucleoprotein component N-terminus
Occurring in:
Occurring in:
RNA families (Rfam)
InterPro annotations
IPR002130
Domain description:
Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
Occurring in:
Occurring in:
IPR034168
Domain description:
Peptidyl-prolyl cis-trans isomerase E, RNA recognition motif
Occurring in:
Occurring in:
IPR020892
Domain description:
Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site
Occurring in:
Occurring in:
IPR034562
Domain description:
U2 small nuclear ribonucleoprotein B'', RNA recognition motif 2
Occurring in:
Occurring in:
IPR034564
Domain description:
U2 small nuclear ribonucleoprotein B'', RNA recognition motif 1
Occurring in:
Occurring in:
IPR002464
Domain description:
DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
Occurring in:
Occurring in:
IPR047490
Domain description:
Serine/arginine repetitive matrix protein 2, cwf21 domain
Occurring in:
Occurring in:
IPR044666
Domain description:
Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like
Occurring in:
Occurring in:
IPR021786
Domain description:
Pre-mRNA splicing factor component Cdc5p/Cef1, C-terminal
Occurring in:
Occurring in:
IPR047240
Domain description:
Pre-mRNA splicing factor component CDC5L/Cef1, second SANT/myb-like domain
Occurring in:
Occurring in:
IPR035655
Domain description:
116kDa U5 small nuclear ribonucleoprotein component, C-terminal
Occurring in:
Occurring in:
IPR014721
Domain description:
Small ribosomal subunit protein uS5 domain 2-type fold, subgroup
Occurring in:
Occurring in:
IPR031950
Domain description:
116kDa U5 small nuclear ribonucleoprotein component, N-terminal
Occurring in:
Occurring in:
IPR042516
Domain description:
Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding domain superfamily
Occurring in:
Occurring in:
Structure domains
CATH domains
2.30.30.100
Class:
Mainly Beta
Architecture:
Roll
Topology:
SH3 type barrels.
Homology:
SH3 type barrels.
Occurring in:
3.30.70.330
Class:
Alpha Beta
Architecture:
2-Layer Sandwich
Topology:
Alpha-Beta Plaits
Homology:
Alpha-Beta Plaits
Occurring in:
3.30.1560.10
Class:
Alpha Beta
Architecture:
2-Layer Sandwich
Topology:
Mago nashi protein
Homology:
Mago nashi
Occurring in:
3.80.10.10
Class:
Alpha Beta
Architecture:
Alpha-Beta Horseshoe
Topology:
Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Homology:
Ribonuclease Inhibitor
Occurring in:
2.40.100.10
Class:
Mainly Beta
Architecture:
Beta Barrel
Topology:
Cyclophilin
Homology:
Cyclophilin-like
Occurring in: