Function and Biology

K2U bound crystal structure of class I type b peptide deformylase from Acinetobacter baumannii

Source organism: Acinetobacter baumannii
Biochemical function: metal ion binding
Biological process: co-translational protein modification
Cellular component: not assigned

EC 3.5.1.88: Peptide deformylase

Reaction catalysed:
Formyl-L-methionyl peptide + H(2)O = formate + methionyl peptide
Systematic name:
Formyl-L-methionyl peptide amidohydrolase
Alternative Name(s):
  • PDF
  • Polypeptide deformylase

GO terms

Biochemical function:
Biological process:
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF01327
Domain description: Polypeptide deformylase
Occurring in:
  1. Peptide deformylase
The deposited structure of PDB entry 6jf5 contains 2 copies of Pfam domain PF01327 (Polypeptide deformylase) in Peptide deformylase. Showing 1 copy in chain A [auth B].

InterPro InterPro annotations
IPR023635
Domain description: Peptide deformylase
Occurring in:
  1. Peptide deformylase
IPR036821
Domain description: Peptide deformylase superfamily
Occurring in:
  1. Peptide deformylase