› 6kw5

Electron Microscopy
10.13Å resolution

The ClassC RSC-Nucleosome Complex

Released:
DOI: 10.2210/pdb6kw5/pdb
PDB entry 6kw5 coloured by chain, front view.
PDB entry 6kw5 coloured by chain, side view.
PDB entry 6kw5 coloured by chain, top view.
Source organisms:
Entry authors: Ye YP, Wu H, Chen KJ, Verma N, Cairns B, Gao N, Chen ZC
Related structures: EMD-0779

Function and Biology Details

Reaction catalysed: 
ATP + H(2)O = ADP + phosphate
Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero 28-mer (preferred)
PDBe Complex ID:
PDB-CPX-510663 (preferred)
Entry contents:
19 distinct polypeptide molecules
2 distinct DNA molecules
Macromolecules (21 distinct):
Chromatin structure-remodeling complex subunit RSC7 Chain: F
Molecule details ›
Chain: F
Length: 435 amino acids
Theoretical weight: 49.72 KDa
Source organism: Saccharomyces cerevisiae S288C
Chromatin structure-remodeling complex protein RSC8 Chains: D, H
Molecule details ›
Chains: D, H
Length: 557 amino acids
Theoretical weight: 63.25 KDa
Source organism: Saccharomyces cerevisiae S288C
Chromatin structure-remodeling complex subunit RSC9 Chain: M
Molecule details ›
Chain: M
Length: 581 amino acids
Theoretical weight: 65.29 KDa
Source organism: Saccharomyces cerevisiae S288C
Chromatin structure-remodeling complex protein RSC6 Chain: I
Molecule details ›
Chain: I
Length: 483 amino acids
Theoretical weight: 54.22 KDa
Source organism: Saccharomyces cerevisiae S288C
Chromatin structure-remodeling complex subunit SFH1 Chain: G
Molecule details ›
Chain: G
Length: 426 amino acids
Theoretical weight: 48.83 KDa
Source organism: Saccharomyces cerevisiae S288C
Chromatin structure-remodeling complex protein RSC58 Chain: A
Molecule details ›
Chain: A
Length: 502 amino acids
Theoretical weight: 57.87 KDa
Source organism: Saccharomyces cerevisiae S288C
Nuclear protein STH1/NPS1 Chains: J, P, Q
Molecule details ›
Chains: J, P, Q
Length: 1359 amino acids
Theoretical weight: 156.98 KDa
Source organism: Saccharomyces cerevisiae S288C
High temperature lethal protein 1 Chain: E
Molecule details ›
Chain: E
Length: 78 amino acids
Theoretical weight: 9.19 KDa
Source organism: Saccharomyces cerevisiae S288C
Chromatin structure-remodeling complex protein RSC30 Chain: C
Molecule details ›
Chain: C
Length: 883 amino acids
Theoretical weight: 101.45 KDa
Source organism: Saccharomyces cerevisiae S288C
Chromatin structure-remodeling complex protein RSC3 Chain: K
Molecule details ›
Chain: K
Length: 885 amino acids
Theoretical weight: 101.83 KDa
Source organism: Saccharomyces cerevisiae S288C
Chromatin structure-remodeling complex subunit RSC4 Chain: X
Molecule details ›
Chain: X
Length: 625 amino acids
Theoretical weight: 72.37 KDa
Source organism: Saccharomyces cerevisiae S288C
Chromatin structure-remodeling complex subunit RSC2 Chain: L
Molecule details ›
Chain: L
Length: 889 amino acids
Theoretical weight: 102.44 KDa
Source organism: Saccharomyces cerevisiae S288C
Histone H4 Chains: S, W
Molecule details ›
Chains: S, W
Length: 103 amino acids
Theoretical weight: 11.39 KDa
Source organism: Xenopus laevis
Expression system: Escherichia coli
Actin-related protein 7 Chain: f
Molecule details ›
Chain: f
Length: 477 amino acids
Theoretical weight: 53.86 KDa
Source organism: Saccharomyces cerevisiae S288C
Regulator of Ty1 transposition protein 102 Chain: h
Molecule details ›
Chain: h
Length: 157 amino acids
Theoretical weight: 17.82 KDa
Source organism: Saccharomyces cerevisiae S288C
Histone H3.2 Chains: R, V
Molecule details ›
Chains: R, V
Length: 136 amino acids
Theoretical weight: 15.42 KDa
Source organism: Xenopus laevis
Expression system: Escherichia coli
Histone H2A type 1 Chains: O, T
Molecule details ›
Chains: O, T
Length: 130 amino acids
Theoretical weight: 14.11 KDa
Source organism: Xenopus laevis
Expression system: Escherichia coli
Histone H4 Chains: U, Y
Molecule details ›
Chains: U, Y
Length: 126 amino acids
Theoretical weight: 13.93 KDa
Source organism: Xenopus laevis
Expression system: Escherichia coli
Actin-like protein ARP9 Chain: g
Molecule details ›
Chain: g
Length: 467 amino acids
Theoretical weight: 53.13 KDa
Source organism: Saccharomyces cerevisiae S288C
DNA 167 Chain: B
Molecule details ›
Chain: B
Length: 167 nucleotides
Theoretical weight: 51.42 KDa
Source organism: Homo sapiens
Expression system: Not provided
DNA 167 Chain: N
Molecule details ›
Chain: N
Length: 167 nucleotides
Theoretical weight: 51.68 KDa
Source organism: Homo sapiens
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand ZN 1 x ZN
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 10.13Å
Relevant EMDB volumes: EMD-0779
Expression systems:
  • Escherichia coli
  • Not provided

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