› 6kxu

X-ray diffraction
2.83Å resolution

BON1

Released:
DOI: 10.2210/pdb6kxu/pdb
PDB entry 6kxu coloured by chain, front view.
PDB entry 6kxu coloured by chain, side view.
PDB entry 6kxu coloured by chain, top view.
Source organism: Arabidopsis thaliana
Entry authors: Wang QC, Jiang MQ, Isupov MN, Sun LF, Wu YK

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-188180 (preferred)
Entry contents:
5 distinct polypeptide molecules
Macromolecules (5 distinct):
Protein BONZAI 1 Chains: A, C, D, F
Molecule details ›
Chains: A, C, D, F
Length: 553 amino acids
Theoretical weight: 61.06 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: Q941L3 (Residues: 30-572; Coverage: 94%)
Gene names: At5g61900, BON1, CPN1, K22G18.2
Sequence domains:
Protein BONZAI 1 Chain: B
Molecule details ›
Chain: B
Length: 528 amino acids
Theoretical weight: 58.42 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: Q941L3 (Residues: 45-572; Coverage: 91%)
Gene names: At5g61900, BON1, CPN1, K22G18.2
Sequence domains:
Protein BONZAI 1 Chain: E
Molecule details ›
Chain: E
Length: 548 amino acids
Theoretical weight: 60.6 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: Q941L3 (Residues: 30-572; Coverage: 94%)
Gene names: At5g61900, BON1, CPN1, K22G18.2
Sequence domains:
Protein BONZAI 1 Chain: G
Molecule details ›
Chain: G
Length: 526 amino acids
Theoretical weight: 58.25 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: Q941L3 (Residues: 46-571; Coverage: 91%)
Gene names: At5g61900, BON1, CPN1, K22G18.2
Sequence domains:
Protein BONZAI 1 Chain: H
Molecule details ›
Chain: H
Length: 553 amino acids
Theoretical weight: 61.07 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: Q941L3 (Residues: 30-572; Coverage: 94%)
Gene names: At5g61900, BON1, CPN1, K22G18.2
Sequence domains:

Ligands and Environments

4 bound ligands:
Ligand EDO 14 x EDO
Ligand GOL 1 x GOL
Ligand MN 10 x MN
Ligand CL 2 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U1
Spacegroup: P21
Unit cell:
a: 122.406Å b: 118.705Å c: 222.317Å
α: 90° β: 90.03° γ: 90°
R-values:
R R work R free
0.206 0.204 0.25
Expression system: Escherichia coli

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